README.md

In shraddhapai/dataExplore: Stats and Viz for Data Exploration

dataExplore

R package with generic tools for data exploration

Current functionality Given matrix, run hclust on top X% most variable and plot Plot dendrogram with colored bars at bottom showing leaf features (color code by sex, age, diagnosis etc.,) Run PCA and plot PC projecions with samples colour-coded by pheno variables Plot missingness in black-and-white matrix * QQplot

Functionality tba: Plot colour-coded matrix cell values - 2-scale bar heatmap.2

shraddhapai/dataExplore documentation built on March 9, 2020, 9:17 a.m.