Man pages for shwetagopaul92/restfulSE
Access matrix-like HDF5 server content or BigQuery content through a SummarizedExperiment interface

assay-BQSummarizedExperiment-missing-methodextract assay data
assayNames-BQSummarizedExperiment-methodPlaceholder for assay name extractor for a...
assays-RESTfulSummarizedExperiment-methodAssays access for RESTfulSummarizedExperiment
basic_clinvarsprovide a collection of basic clinical variables to limit...
BQ3_Arraycreate BQ3_Array instance given url (filepath) and entity...
BQ3_Array-classextension of DelayedArray for BigQuery content
BQ3_ArraySeed-classBQ3_Array for BigQuery matrix content
BQ3_Matrix-classextension of DelayedMatrix for HDF Server content
BQ3_Sourceconstruct a BigQuery resource interface
BQ3_Source-classRepresent information about a BigQuery resource with a...
bqConngenerate a connection to BigQuery for specific dataset
BQM_Arraycreate BQM_Array instance given url (filepath) and entity...
BQM_Array-classextension of DelayedArray for BigQuery content
BQM_ArraySeed-classBQM_Array for BigQuery matrix content
BQM_Matrix-classextension of DelayedMatrix for HDF Server content
BQM_Sourceconstruct a BigQuery resource interface, for a matrix-like...
BQM_Source-classRepresent information about a BigQuery resource with a...
BQSummarizedExperimentDefine a class to use BigQuery data through...
cgcConnSimplify connection to a BigQuery dataset for the project...
dim-BQ3_ArraySeed-methoddim derived from saved dimnames
dim-BQM_ArraySeed-methoddim derived from saved dimnames
dimnames-BQ3_ArraySeed-methoddimnames are saved in the BQ3_ArraySeed
dimnames-BQM_ArraySeed-methoddimnames are saved in the BQM_ArraySeed
dim-RESTfulSummarizedExperiment-methodDimension access for RESTfulSummarizedExperiment
goPattCreate a data.frame with ENSEMBL and SYMBOL identifiers...
gtexTissConvenience function for access to gene-level GTEx tissues,...
isbCgcDatasetsAccess the dataset names in the "isb-cgc" project
isbCgcTablesList the tables in a selected dataset
pancan_SEillustrate DelayedArray assay from BigQuery backend in...
RESTfulSummarizedExperimentConstruct RESTfulSummarizedExperiment
RESTfulSummarizedExperiment-classHDF5Server-based assay for SummarizedExperiment
se100kConvenience functions using HSDS server to extract tenx...
seByTumorGiven a BigQueryConnection to the 2017 GDC-oriented ISB TCGA...
seByTumor_2016Given a BigQueryConnection to the 2016 ISB TCGA bigtables,...
tasicCortexA set of mouse cortex marker genes.
shwetagopaul92/restfulSE documentation built on Oct. 22, 2018, 8:58 a.m.