ped2kinpair: Pedigree to pairwise kinship
In signaturescience/skater: Utilities for SNP-Based Kinship Analysis
ped2kinpair R Documentation
Pedigree to pairwise kinship
Description
Converts a pedigree class object from fam2ped to a pairwise list of relationships and their expected/theoretical kinship coefficient.
Usage
ped2kinpair(ped)
Arguments
ped
A "pedigree" class object from fam2ped.
Value
A tibble containing all pairwise kinship coefficients from the input pedigree.
Examples
famfile <- system.file("extdata", "3gens.fam", package="skater", mustWork=TRUE)
famfile %>%
read_fam() %>%
fam2ped() %>%
dplyr::mutate(kinpairs=purrr::map(ped, ped2kinpair)) %>%
dplyr::select(fid, kinpairs) %>%
tidyr::unnest(cols=kinpairs)
signaturescience/skater documentation built on Feb. 11, 2023, 4:19 p.m.
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| ped2kinpair | R Documentation |
Pedigree to pairwise kinship
Description
Converts a pedigree class object from fam2ped to a pairwise list of relationships and their expected/theoretical kinship coefficient.
Usage
ped2kinpair(ped)
Arguments
ped |
A "pedigree" class object from fam2ped. |
Value
A tibble containing all pairwise kinship coefficients from the input pedigree.
Examples
famfile <- system.file("extdata", "3gens.fam", package="skater", mustWork=TRUE)
famfile %>%
read_fam() %>%
fam2ped() %>%
dplyr::mutate(kinpairs=purrr::map(ped, ped2kinpair)) %>%
dplyr::select(fid, kinpairs) %>%
tidyr::unnest(cols=kinpairs)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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