Man pages for simplydch/GeneDrop
Drops Genes Down A Pedigree And Tracks Alleles
| add_missing_parents | Function to add missing parents |
| allele_track_back | Function to track gene-dropped alleles back through ancestors |
| allele_track_back_sing | Function to track a gene-dropped allele back through... |
| allele_track_forw | Function to track gene-dropped alleles forward through... |
| allele_track_forw_sing | Function to track a gene-dropped allele forward through... |
| allele_track_object-class | An S4 class to store to store allele tracking output |
| calc_ped_depth | Function to calculate pedigree depth |
| calc_recom_freq | Function to calculate recombination frequency |
| cohort_numeric | Function to convert cohorts to numeric values |
| complete_ped_links | Function to complete pedigree links |
| est_cohort | Function to estimate missing cohorts |
| find_least_common | Function to find least common value in a vector |
| find_most_common | Function to find most common value in a vector |
| fix_pedigree | Function to ensure pedigree is correctly structured for gene... |
| genedrop | Function to perform gene-dropping |
| GeneDropEx_hap | Dataset GeneDropEx_hap |
| GeneDropEx_map | Dataset GeneDropEx_map |
| GeneDropEx_ped | Dataset GeneDropEx_ped |
| gene_drop_object-class | An S4 class to store gene-dropping output |
| offspring_with_allele | Function to find offspring that have a parents allele |
| ped_col_present | Function to check pedigree columns |
| plot_allele_desc | Function to plot inheritance of alleles |
| reduce_hap_code | Function to condense haplotype source information |
| test_order | Function to check pedigree order |
