est_cohort: Function to estimate missing cohorts
In simplydch/GeneDrop: Drops Genes Down A Pedigree And Tracks Alleles
View source: R/pedigree_fix_fuctions.R
est_cohort R Documentation
Function to estimate missing cohorts
Description
A function that estimates cohorts for individuals without a known cohort.
It uses only pedigree and cohort information and should be secondary to more
accurate predictions. If offspring information is present this is used, based on a provided
to reproduction. When offspring data is absent a mean of sibling cohorts is used.
The function loops using the new estimates until no further cohorts can be
estimated.
Usage
est_cohort(pedigree, tt_rep = 2)
Arguments
pedigree
A dataframe or matrix. A pedigree with ID, Sire and Dam columns
tt_rep
integer. Time to reproduction. A value of the length of time between
birth and reproduction. Defaults to 2
simplydch/GeneDrop documentation built on July 8, 2024, 8:17 p.m.
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View source: R/pedigree_fix_fuctions.R
| est_cohort | R Documentation |
Function to estimate missing cohorts
Description
A function that estimates cohorts for individuals without a known cohort. It uses only pedigree and cohort information and should be secondary to more accurate predictions. If offspring information is present this is used, based on a provided to reproduction. When offspring data is absent a mean of sibling cohorts is used. The function loops using the new estimates until no further cohorts can be estimated.
Usage
est_cohort(pedigree, tt_rep = 2)
Arguments
pedigree |
A dataframe or matrix. A pedigree with ID, Sire and Dam columns |
tt_rep |
integer. Time to reproduction. A value of the length of time between birth and reproduction. Defaults to 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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