dgiSets: Druggable Genome Interaction Database for Cancer
In sinnweja/panoply: Personalized Cancer Report
Description
Druggable Genome Interaction Database annotation for Cancer Drugs and
their targets
Usage
1
data("dgiSets")
Format
The adjacency matrix dgi.adj has drugs (rows) and a 1 marked
where the drug targets a gene (columns). The same information is
stored as a list of gene names for each drug in dgi.gs. The
data.frame dgiDrug has each drug in a row, with genes they
target, and sources for which drug database contained it in these
columns:
DrugCancer drugs
GeneIDGene Symbols of genes targeted by the drug
SynonymDrug synonyms
DGIdbLogical, curated by DGI-db?
DrugBankCurateLogical, curated by Drug Bank list?
sinnweja/panoply documentation built on Aug. 9, 2019, 9:56 a.m.
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Description
Druggable Genome Interaction Database annotation for Cancer Drugs and their targets
Usage
1 | data("dgiSets")
|
Format
The adjacency matrix dgi.adj has drugs (rows) and a 1 marked
where the drug targets a gene (columns). The same information is
stored as a list of gene names for each drug in dgi.gs. The
data.frame dgiDrug has each drug in a row, with genes they
target, and sources for which drug database contained it in these
columns:
DrugCancer drugs
GeneIDGene Symbols of genes targeted by the drug
SynonymDrug synonyms
DGIdbLogical, curated by DGI-db?
DrugBankCurateLogical, curated by Drug Bank list?
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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