irbtox_listing: Create listing of AEs for Mayo DSMB reports

In sjacobson94/clinicaltrials: A Collection of Functions for use in CCS

Description

This function is design to replicate irbtoxrep.sas macro AE listing output for Mayo DSMB reports.

Usage

irbtox_listing(
  cytox,
  id = "dcntr_id",
  byvar = "arm",
  grade.term = "grade",
  relation.term = "rel_smed",
  tox.term = "toxicity"
)

Arguments

cytox	The toxicity dataset containing multiple observations per patient with one observation per AE > grade 0
id	The patient ID variable used in the dataset
byvar	Variable used to separate summary by arm. If not present, "All Patients" printed for arm
grade.term	Character. The variable that contains the AE grade
relation.term	Character. The variable that containst the AE attribution
tox.term	Character. The variable that contains the toxicity (MEDRA) code

Value

This function creates a listing of the AE events for the Mayo DSMB report

Author(s)

Sawyer Jacobson

Adam Pettinger

Examples

#With data loaded for A041501

crtlibn(d = 'A041501')

irb.listing <- irbtox_listing(cytox = cytox, id = "dcntr_id", byvar = "arm", tox.term = "toxicity")
irb.listing$table

sjacobson94/clinicaltrials documentation built on Oct. 27, 2020, 6:43 p.m.