revdep/problems.md
In sjmgarnier/viridis: Colorblind-Friendly Color Maps for R
aweSOM
- Version: 1.3
- GitHub: NA
- Source code: https://github.com/cran/aweSOM
- Date/Publication: 2022-08-30 15:40:02 UTC
- Number of recursive dependencies: 98
Run revdepcheck::revdep_details(, "aweSOM") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘DT’ ‘bslib’ ‘rclipboard’ ‘rmarkdown’
All declared Imports should be used.
bangladesh
- Version: 1.0.0
- GitHub: NA
- Source code: https://github.com/cran/bangladesh
- Date/Publication: 2022-10-28 16:30:05 UTC
- Number of recursive dependencies: 93
Run revdepcheck::revdep_details(, "bangladesh") for more info
In both
- checking installed package size ... NOTE
installed size is 5.7Mb
sub-directories of 1Mb or more:
data 4.9Mb
baRulho
- Version: 1.0.6
- GitHub: https://github.com/maRce10/baRulho
- Source code: https://github.com/cran/baRulho
- Date/Publication: 2022-03-01 21:40:05 UTC
- Number of recursive dependencies: 91
Run revdepcheck::revdep_details(, "baRulho") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘Rraven’
bayesvl
- Version: 0.8.5
- GitHub: https://github.com/sshpa/bayesvl
- Source code: https://github.com/cran/bayesvl
- Date/Publication: 2019-05-24 13:40:06 UTC
- Number of recursive dependencies: 65
Run revdepcheck::revdep_details(, "bayesvl") for more info
In both
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘dplyr’
All declared Imports should be used.
bioRad
- Version: 0.7.3
- GitHub: https://github.com/adokter/bioRad
- Source code: https://github.com/cran/bioRad
- Date/Publication: 2023-10-20 11:00:07 UTC
- Number of recursive dependencies: 131
Run revdepcheck::revdep_details(, "bioRad") for more info
In both
- checking installed package size ... NOTE
installed size is 5.6Mb
sub-directories of 1Mb or more:
data 1.6Mb
extdata 2.0Mb
c3
- Version: 0.3.0
- GitHub: https://github.com/mrjoh3/c3
- Source code: https://github.com/cran/c3
- Date/Publication: 2020-03-16 13:30:08 UTC
- Number of recursive dependencies: 75
Run revdepcheck::revdep_details(, "c3") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
catmaply
- Version: 0.9.3
- GitHub: https://github.com/VerkehrsbetriebeZuerich/catmaply
- Source code: https://github.com/cran/catmaply
- Date/Publication: 2023-01-05 19:20:02 UTC
- Number of recursive dependencies: 125
Run revdepcheck::revdep_details(, "catmaply") for more info
In both
- checking installed package size ... NOTE
installed size is 38.0Mb
sub-directories of 1Mb or more:
doc 37.7Mb
chronicle
- Version: 0.3
- GitHub: NA
- Source code: https://github.com/cran/chronicle
- Date/Publication: 2021-06-25 05:00:02 UTC
- Number of recursive dependencies: 146
Run revdepcheck::revdep_details(, "chronicle") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘DT’ ‘dplyr’ ‘prettydoc’ ‘rmdformats’ ‘skimr’
All declared Imports should be used.
CIDER
- Version: 0.99.1
- GitHub: https://github.com/zhiyhu/CIDER
- Source code: https://github.com/cran/CIDER
- Date/Publication: 2022-09-19 03:16:07 UTC
- Number of recursive dependencies: 169
Run revdepcheck::revdep_details(, "CIDER") for more info
In both
- checking whether package ‘CIDER’ can be installed ... WARNING
Found the following significant warnings:
Warning: replacing previous import ‘Seurat::components’ by ‘igraph::components’ when loading ‘CIDER’
See ‘/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/CIDER/new/CIDER.Rcheck/00install.out’ for details.
CINNA
- Version: 1.2.2
- GitHub: NA
- Source code: https://github.com/cran/CINNA
- Date/Publication: 2023-08-08 16:40:02 UTC
- Number of recursive dependencies: 149
Run revdepcheck::revdep_details(, "CINNA") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘circlize’ ‘utils’
All declared Imports should be used.
clustMD
- Version: 1.2.1
- GitHub: NA
- Source code: https://github.com/cran/clustMD
- Date/Publication: 2017-05-08 17:19:20 UTC
- Number of recursive dependencies: 41
Run revdepcheck::revdep_details(, "clustMD") for more info
In both
- checking Rd files ... NOTE
checkRd: (-1) dtmvnom.Rd:30: Escaped LaTeX specials: \&
CoordinateCleaner
- Version: 3.0.1
- GitHub: https://github.com/ropensci/CoordinateCleaner
- Source code: https://github.com/cran/CoordinateCleaner
- Date/Publication: 2023-10-24 21:20:02 UTC
- Number of recursive dependencies: 107
Run revdepcheck::revdep_details(, "CoordinateCleaner") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 144 marked UTF-8 strings
countries
- Version: 1.2.0
- GitHub: https://github.com/fbellelli/countries
- Source code: https://github.com/cran/countries
- Date/Publication: 2024-01-21 11:02:46 UTC
- Number of recursive dependencies: 84
Run revdepcheck::revdep_details(, "countries") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 9044 marked UTF-8 strings
dartR.base
- Version: 0.65
- GitHub: NA
- Source code: https://github.com/cran/dartR.base
- Date/Publication: 2023-11-17 20:00:08 UTC
- Number of recursive dependencies: 269
Run revdepcheck::revdep_details(, "dartR.base") for more info
In both
- checking installed package size ... NOTE
installed size is 5.1Mb
sub-directories of 1Mb or more:
R 2.0Mb
help 2.2Mb
DataVisualizations
- Version: 1.3.2
- GitHub: https://github.com/Mthrun/DataVisualizations
- Source code: https://github.com/cran/DataVisualizations
- Date/Publication: 2023-10-10 08:10:02 UTC
- Number of recursive dependencies: 155
Run revdepcheck::revdep_details(, "DataVisualizations") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘FCPS’
dendextend
- Version: 1.17.1
- GitHub: https://github.com/talgalili/dendextend
- Source code: https://github.com/cran/dendextend
- Date/Publication: 2023-03-25 12:50:10 UTC
- Number of recursive dependencies: 132
Run revdepcheck::revdep_details(, "dendextend") for more info
In both
-
checking package dependencies ... NOTE
Packages which this enhances but not available for checking:
'ggdendro', 'dendroextras', 'Hmisc', 'WGCNA', 'moduleColor',
'distory', 'phangorn', 'zoo'
-
checking installed package size ... NOTE
installed size is 5.4Mb
sub-directories of 1Mb or more:
doc 4.2Mb
-
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘WGCNA’, ‘dendroextras’, ‘moduleColor’, ‘distory’, ‘phangorn’, ‘ggdendro’, ‘zoo’
DiagrammeR
- Version: 1.0.10
- GitHub: https://github.com/rich-iannone/DiagrammeR
- Source code: https://github.com/cran/DiagrammeR
- Date/Publication: 2023-05-18 14:30:07 UTC
- Number of recursive dependencies: 100
Run revdepcheck::revdep_details(, "DiagrammeR") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 1 marked UTF-8 string
DSjobtracker
- Version: 2.0.0
- GitHub: https://github.com/thiyangt/DSjobtracker
- Source code: https://github.com/cran/DSjobtracker
- Date/Publication: 2023-12-09 07:40:02 UTC
- Number of recursive dependencies: 77
Run revdepcheck::revdep_details(, "DSjobtracker") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 386 marked UTF-8 strings
dynaSpec
- Version: 1.0.1
- GitHub: https://github.com/maRce10/dynaSpec
- Source code: https://github.com/cran/dynaSpec
- Date/Publication: 2021-03-10 00:00:05 UTC
- Number of recursive dependencies: 102
Run revdepcheck::revdep_details(, "dynaSpec") for more info
In both
-
checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘NatureSounds’ ‘av’ ‘magrittr’ ‘stats’
All declared Imports should be used.
-
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘warbleR’
eclust
- Version: 0.1.0
- GitHub: https://github.com/sahirbhatnagar/eclust
- Source code: https://github.com/cran/eclust
- Date/Publication: 2017-01-26 12:08:12
- Number of recursive dependencies: 209
Run revdepcheck::revdep_details(, "eclust") for more info
In both
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘pander’
All declared Imports should be used.
ecotraj
- Version: 0.1.1
- GitHub: NA
- Source code: https://github.com/cran/ecotraj
- Date/Publication: 2023-10-30 17:10:02 UTC
- Number of recursive dependencies: 169
Run revdepcheck::revdep_details(, "ecotraj") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 42 marked UTF-8 strings
eesim
- Version: 0.1.0
- GitHub: https://github.com/sakoehler7/eesim
- Source code: https://github.com/cran/eesim
- Date/Publication: 2017-06-03 17:55:52 UTC
- Number of recursive dependencies: 64
Run revdepcheck::revdep_details(, "eesim") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
effectR
- Version: 1.0.2
- GitHub: NA
- Source code: https://github.com/cran/effectR
- Date/Publication: 2018-09-30 21:30:03 UTC
- Number of recursive dependencies: 84
Run revdepcheck::revdep_details(, "effectR") for more info
In both
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘rmarkdown’
All declared Imports should be used.
EHRtemporalVariability
- Version: 1.2.1
- GitHub: https://github.com/hms-dbmi/EHRtemporalVariability
- Source code: https://github.com/cran/EHRtemporalVariability
- Date/Publication: 2024-01-26 13:50:06 UTC
- Number of recursive dependencies: 130
Run revdepcheck::revdep_details(, "EHRtemporalVariability") for more info
In both
- checking installed package size ... NOTE
installed size is 10.4Mb
sub-directories of 1Mb or more:
doc 5.1Mb
extdata 5.1Mb
eiExpand
- Version: 1.0.5
- GitHub: NA
- Source code: https://github.com/cran/eiExpand
- Date/Publication: 2023-03-14 18:50:08 UTC
- Number of recursive dependencies: 100
Run revdepcheck::revdep_details(, "eiExpand") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 1 marked UTF-8 string
escalation
- Version: 0.1.5
- GitHub: NA
- Source code: https://github.com/cran/escalation
- Date/Publication: 2023-05-29 18:10:02 UTC
- Number of recursive dependencies: 127
Run revdepcheck::revdep_details(, "escalation") for more info
In both
- checking installed package size ... NOTE
installed size is 13.7Mb
sub-directories of 1Mb or more:
doc 13.1Mb
fastai
- Version: 2.2.1
- GitHub: https://github.com/EagerAI/fastai
- Source code: https://github.com/cran/fastai
- Date/Publication: 2023-03-12 00:10:02 UTC
- Number of recursive dependencies: 110
Run revdepcheck::revdep_details(, "fastai") for more info
In both
- checking installed package size ... NOTE
installed size is 5.2Mb
sub-directories of 1Mb or more:
doc 2.9Mb
help 1.3Mb
FielDHub
- Version: 1.3.4
- GitHub: https://github.com/DidierMurilloF/FielDHub
- Source code: https://github.com/cran/FielDHub
- Date/Publication: 2023-10-19 21:20:02 UTC
- Number of recursive dependencies: 118
Run revdepcheck::revdep_details(, "FielDHub") for more info
In both
- checking installed package size ... NOTE
installed size is 7.0Mb
sub-directories of 1Mb or more:
R 2.0Mb
doc 3.0Mb
help 1.1Mb
fitbitViz
- Version: 1.0.5
- GitHub: https://github.com/mlampros/fitbitViz
- Source code: https://github.com/cran/fitbitViz
- Date/Publication: 2023-01-06 15:30:02 UTC
- Number of recursive dependencies: 150
Run revdepcheck::revdep_details(, "fitbitViz") for more info
In both
- checking installed package size ... NOTE
installed size is 6.0Mb
sub-directories of 1Mb or more:
doc 4.3Mb
fitODBOD
- Version: 1.5.0
- GitHub: https://github.com/Amalan-ConStat/fitODBOD
- Source code: https://github.com/cran/fitODBOD
- Date/Publication: 2023-01-15 11:40:06 UTC
- Number of recursive dependencies: 113
Run revdepcheck::revdep_details(, "fitODBOD") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘extraDistr’
foodingraph
- Version: 0.1.0
- GitHub: https://github.com/vgasque/foodingraph
- Source code: https://github.com/cran/foodingraph
- Date/Publication: 2019-10-06 11:30:08 UTC
- Number of recursive dependencies: 60
Run revdepcheck::revdep_details(, "foodingraph") for more info
In both
-
checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘grid’
All declared Imports should be used.
-
checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
forestr
- Version: 2.0.2
- GitHub: https://github.com/atkinsjeff/forestr
- Source code: https://github.com/cran/forestr
- Date/Publication: 2020-04-14 19:20:05 UTC
- Number of recursive dependencies: 63
Run revdepcheck::revdep_details(, "forestr") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘tibble’ ‘viridis’
All declared Imports should be used.
geocmeans
- Version: 0.3.4
- GitHub: https://github.com/JeremyGelb/geocmeans
- Source code: https://github.com/cran/geocmeans
- Date/Publication: 2023-09-12 03:10:02 UTC
- Number of recursive dependencies: 194
Run revdepcheck::revdep_details(, "geocmeans") for more info
In both
- checking installed package size ... NOTE
installed size is 5.8Mb
sub-directories of 1Mb or more:
extdata 3.0Mb
geouy
- Version: 0.2.8
- GitHub: https://github.com/RichDeto/geouy
- Source code: https://github.com/cran/geouy
- Date/Publication: 2023-08-23 15:10:02 UTC
- Number of recursive dependencies: 104
Run revdepcheck::revdep_details(, "geouy") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 64 marked Latin-1 strings
Note: found 25 marked UTF-8 strings
ggpointdensity
- Version: 0.1.0
- GitHub: https://github.com/LKremer/ggpointdensity
- Source code: https://github.com/cran/ggpointdensity
- Date/Publication: 2019-08-28 14:30:02 UTC
- Number of recursive dependencies: 33
Run revdepcheck::revdep_details(, "ggpointdensity") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
ggraph
- Version: 2.1.0
- GitHub: https://github.com/thomasp85/ggraph
- Source code: https://github.com/cran/ggraph
- Date/Publication: 2022-10-09 20:33:19 UTC
- Number of recursive dependencies: 100
Run revdepcheck::revdep_details(, "ggraph") for more info
In both
-
checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
-
checking installed package size ... NOTE
installed size is 5.7Mb
sub-directories of 1Mb or more:
doc 3.5Mb
glmmfields
- Version: 0.1.8
- GitHub: https://github.com/seananderson/glmmfields
- Source code: https://github.com/cran/glmmfields
- Date/Publication: 2023-10-20 17:50:02 UTC
- Number of recursive dependencies: 109
Run revdepcheck::revdep_details(, "glmmfields") for more info
In both
- checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
gwpcormapper
- Version: 0.1.3
- GitHub: https://github.com/gwpcor/gwpcormapper
- Source code: https://github.com/cran/gwpcormapper
- Date/Publication: 2021-12-09 16:00:02 UTC
- Number of recursive dependencies: 117
Run revdepcheck::revdep_details(, "gwpcormapper") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘DT’ ‘attempt’ ‘corpcor’ ‘glue’ ‘htmltools’ ‘pkgload’ ‘processx’
‘tools’
All declared Imports should be used.
heatmaply
- Version: 1.5.0
- GitHub: https://github.com/talgalili/heatmaply
- Source code: https://github.com/cran/heatmaply
- Date/Publication: 2023-10-06 20:50:02 UTC
- Number of recursive dependencies: 112
Run revdepcheck::revdep_details(, "heatmaply") for more info
In both
- checking installed package size ... NOTE
installed size is 5.5Mb
sub-directories of 1Mb or more:
doc 5.1Mb
Hmisc
- Version: 5.1-1
- GitHub: NA
- Source code: https://github.com/cran/Hmisc
- Date/Publication: 2023-09-12 12:52:37 UTC
- Number of recursive dependencies: 182
Run revdepcheck::revdep_details(, "Hmisc") for more info
In both
- checking R code for possible problems ... NOTE
html_describe_con: multiple local function definitions for ‘g’ with
different formal arguments
httk
- Version: 2.3.0
- GitHub: https://github.com/USEPA/CompTox-ExpoCast-httk
- Source code: https://github.com/cran/httk
- Date/Publication: 2023-12-08 18:50:02 UTC
- Number of recursive dependencies: 108
Run revdepcheck::revdep_details(, "httk") for more info
In both
- checking installed package size ... NOTE
installed size is 6.6Mb
sub-directories of 1Mb or more:
data 2.2Mb
doc 2.3Mb
help 1.1Mb
industRial
- Version: 0.1.0
- GitHub: https://github.com/J-Ramalho/industRial
- Source code: https://github.com/cran/industRial
- Date/Publication: 2021-06-11 09:40:02 UTC
- Number of recursive dependencies: 187
Run revdepcheck::revdep_details(, "industRial") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 2 marked UTF-8 strings
intSDM
- Version: 2.0.2
- GitHub: NA
- Source code: https://github.com/cran/intSDM
- Date/Publication: 2023-10-20 09:00:04 UTC
- Number of recursive dependencies: 140
Run revdepcheck::revdep_details(, "intSDM") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
IOHanalyzer
- Version: 0.1.8.6
- GitHub: https://github.com/IOHprofiler/IOHAnalyzer
- Source code: https://github.com/cran/IOHanalyzer
- Date/Publication: 2023-12-04 14:30:07 UTC
- Number of recursive dependencies: 141
Run revdepcheck::revdep_details(, "IOHanalyzer") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 102 marked UTF-8 strings
iSEE
- Version: 2.14.0
- GitHub: https://github.com/iSEE/iSEE
- Source code: https://github.com/cran/iSEE
- Date/Publication: 2023-10-24
- Number of recursive dependencies: 212
Run revdepcheck::revdep_details(, "iSEE") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘scRNAseq’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
leri
- Version: 0.0.1
- GitHub: https://github.com/earthlab/leri
- Source code: https://github.com/cran/leri
- Date/Publication: 2019-09-09 11:00:02 UTC
- Number of recursive dependencies: 92
Run revdepcheck::revdep_details(, "leri") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘maptools’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
lineartestr
- Version: 1.0.0
- GitHub: https://github.com/FedericoGarza/lineartestr
- Source code: https://github.com/cran/lineartestr
- Date/Publication: 2020-06-12 09:10:20 UTC
- Number of recursive dependencies: 81
Run revdepcheck::revdep_details(, "lineartestr") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
memoria
- Version: 1.0.0
- GitHub: NA
- Source code: https://github.com/cran/memoria
- Date/Publication: 2019-05-17 08:00:02 UTC
- Number of recursive dependencies: 157
Run revdepcheck::revdep_details(, "memoria") for more info
In both
- checking package subdirectories ... NOTE
Problems with news in ‘NEWS.md’:
No news entries found.
metaGE
- Version: 1.0.3
- GitHub: NA
- Source code: https://github.com/cran/metaGE
- Date/Publication: 2023-09-28 08:50:02 UTC
- Number of recursive dependencies: 149
Run revdepcheck::revdep_details(, "metaGE") for more info
In both
- checking installed package size ... NOTE
installed size is 5.2Mb
sub-directories of 1Mb or more:
data 4.2Mb
MetricGraph
- Version: 1.2.0
- GitHub: https://github.com/davidbolin/MetricGraph
- Source code: https://github.com/cran/MetricGraph
- Date/Publication: 2023-11-07 10:10:16 UTC
- Number of recursive dependencies: 128
Run revdepcheck::revdep_details(, "MetricGraph") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
mobirep
- Version: 0.2.3
- GitHub: NA
- Source code: https://github.com/cran/mobirep
- Date/Publication: 2021-04-22 14:00:09 UTC
- Number of recursive dependencies: 98
Run revdepcheck::revdep_details(, "mobirep") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘geomorph’
moderndive
- Version: 0.5.5
- GitHub: https://github.com/moderndive/moderndive
- Source code: https://github.com/cran/moderndive
- Date/Publication: 2022-12-01 22:20:02 UTC
- Number of recursive dependencies: 108
Run revdepcheck::revdep_details(, "moderndive") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 5238 marked UTF-8 strings
myClim
- Version: 1.0.12
- GitHub: https://github.com/ibot-geoecology/myClim
- Source code: https://github.com/cran/myClim
- Date/Publication: 2023-11-16 22:00:02 UTC
- Number of recursive dependencies: 107
Run revdepcheck::revdep_details(, "myClim") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘rTubeDB’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
noaastormevents
- Version: 0.2.0
- GitHub: https://github.com/geanders/noaastormevents
- Source code: https://github.com/cran/noaastormevents
- Date/Publication: 2021-01-21 10:20:06 UTC
- Number of recursive dependencies: 138
Run revdepcheck::revdep_details(, "noaastormevents") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘hurricaneexposuredata’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
nullabor
- Version: 0.3.9
- GitHub: https://github.com/dicook/nullabor
- Source code: https://github.com/cran/nullabor
- Date/Publication: 2020-02-25 21:50:02 UTC
- Number of recursive dependencies: 79
Run revdepcheck::revdep_details(, "nullabor") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘forecast’ ‘rlang’ ‘tsibble’ ‘viridis’
All declared Imports should be used.
occCite
- Version: 0.5.6
- GitHub: https://github.com/ropensci/occCite
- Source code: https://github.com/cran/occCite
- Date/Publication: 2022-08-05 11:40:02 UTC
- Number of recursive dependencies: 179
Run revdepcheck::revdep_details(, "occCite") for more info
In both
-
checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘httr’
All declared Imports should be used.
-
checking data for non-ASCII characters ... NOTE
Note: found 7 marked UTF-8 strings
ohun
- Version: 1.0.1
- GitHub: https://github.com/ropensci/ohun
- Source code: https://github.com/cran/ohun
- Date/Publication: 2023-11-17 11:30:02 UTC
- Number of recursive dependencies: 101
Run revdepcheck::revdep_details(, "ohun") for more info
In both
- checking installed package size ... NOTE
installed size is 6.8Mb
sub-directories of 1Mb or more:
doc 6.1Mb
pdSpecEst
- Version: 1.2.4
- GitHub: https://github.com/JorisChau/pdSpecEst
- Source code: https://github.com/cran/pdSpecEst
- Date/Publication: 2020-01-08 09:10:07 UTC
- Number of recursive dependencies: 89
Run revdepcheck::revdep_details(, "pdSpecEst") for more info
In both
-
checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
-
checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
permutes
- Version: 2.8
- GitHub: NA
- Source code: https://github.com/cran/permutes
- Date/Publication: 2023-09-28 14:00:02 UTC
- Number of recursive dependencies: 103
Run revdepcheck::revdep_details(, "permutes") for more info
In both
-
checking examples ... ERROR
```
Running examples in ‘permutes-Ex.R’ failed
The error most likely occurred in:
Name: clusterperm.lmer
Title: Cluster-based permutation tests for time series data, based on
mixed-effects models or other 'buildmer' models.
Aliases: clusterperm.lmer
** Examples
...
object 'unpackedMatrix_diag_get' not found
Warning in diag(from, names = FALSE) :
object 'unpackedMatrix_diag_get' not found
Error in diag(from, names = FALSE) :
object 'unpackedMatrix_diag_get' not found
Warning in diag(from, names = FALSE) :
object 'unpackedMatrix_diag_get' not found
Error in *tmp*[[i]] : subscript out of bounds
Calls: clusterperm.lmer -> clusterperm.work
Execution halted
```
Platypus
- Version: 3.4.1
- GitHub: NA
- Source code: https://github.com/cran/Platypus
- Date/Publication: 2022-08-15 07:20:20 UTC
- Number of recursive dependencies: 359
Run revdepcheck::revdep_details(, "Platypus") for more info
In both
-
checking package dependencies ... ERROR
```
Packages suggested but not available:
'ggseqlogo', 'Matrix.utils', 'monocle3', 'ProjecTILs',
'SeuratWrappers', 'vanddraabe'
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
prioriactions
- Version: 0.5.0
- GitHub: https://github.com/prioriactions/prioriactions
- Source code: https://github.com/cran/prioriactions
- Date/Publication: 2023-08-13 12:40:02 UTC
- Number of recursive dependencies: 135
Run revdepcheck::revdep_details(, "prioriactions") for more info
In both
-
checking package dependencies ... ERROR
```
Packages suggested but not available: 'gurobi', 'Rcplex', 'rcbc'
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
qreport
- Version: 1.0-0
- GitHub: NA
- Source code: https://github.com/cran/qreport
- Date/Publication: 2023-09-12 22:10:02 UTC
- Number of recursive dependencies: 78
Run revdepcheck::revdep_details(, "qreport") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘mice’
RcmdrPlugin.BiclustGUI
- Version: 1.1.3.1
- GitHub: NA
- Source code: https://github.com/cran/RcmdrPlugin.BiclustGUI
- Date/Publication: 2022-05-23 13:03:37 UTC
- Number of recursive dependencies: 191
Run revdepcheck::revdep_details(, "RcmdrPlugin.BiclustGUI") for more info
In both
- checking package dependencies ... NOTE
Depends: includes the non-default packages:
'biclust', 'fabia', 'iBBiG', 'superbiclust', 'BcDiag', 'BicARE',
's4vd', 'BiBitR'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
rcontroll
- Version: 0.1.1
- GitHub: https://github.com/sylvainschmitt/rcontroll
- Source code: https://github.com/cran/rcontroll
- Date/Publication: 2023-09-07 08:40:02 UTC
- Number of recursive dependencies: 129
Run revdepcheck::revdep_details(, "rcontroll") for more info
In both
-
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘nominatimlite’, ‘lutz’
-
checking data for non-ASCII characters ... NOTE
Note: found 1 marked UTF-8 string
reinsureR
- Version: 0.1.0
- GitHub: NA
- Source code: https://github.com/cran/reinsureR
- Date/Publication: 2018-02-20 19:07:33 UTC
- Number of recursive dependencies: 34
Run revdepcheck::revdep_details(, "reinsureR") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
rfars
- Version: 0.3.0
- GitHub: https://github.com/s87jackson/rfars
- Source code: https://github.com/cran/rfars
- Date/Publication: 2023-05-05 09:40:02 UTC
- Number of recursive dependencies: 92
Run revdepcheck::revdep_details(, "rfars") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 806 marked UTF-8 strings
rKOMICS
- Version: 1.3
- GitHub: NA
- Source code: https://github.com/cran/rKOMICS
- Date/Publication: 2023-06-29 22:40:03 UTC
- Number of recursive dependencies: 138
Run revdepcheck::revdep_details(, "rKOMICS") for more info
In both
- checking installed package size ... NOTE
installed size is 24.8Mb
sub-directories of 1Mb or more:
extdata 24.0Mb
RprobitB
- Version: 1.1.2
- GitHub: https://github.com/loelschlaeger/RprobitB
- Source code: https://github.com/cran/RprobitB
- Date/Publication: 2022-11-06 17:40:10 UTC
- Number of recursive dependencies: 120
Run revdepcheck::revdep_details(, "RprobitB") for more info
In both
- checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
rSPDE
- Version: 2.3.3
- GitHub: https://github.com/davidbolin/rSPDE
- Source code: https://github.com/cran/rSPDE
- Date/Publication: 2023-11-05 22:30:02 UTC
- Number of recursive dependencies: 110
Run revdepcheck::revdep_details(, "rSPDE") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
scater
- Version: 1.30.1
- GitHub: NA
- Source code: https://github.com/cran/scater
- Date/Publication: 2023-11-16
- Number of recursive dependencies: 198
Run revdepcheck::revdep_details(, "scater") for more info
In both
-
checking examples ... ERROR
```
Running examples in ‘scater-Ex.R’ failed
The error most likely occurred in:
Name: projectReducedDim
Title: Project cells into an arbitrary dimensionality reduction space.
Aliases: projectReducedDim projectReducedDim,matrix-method
projectReducedDim,SummarizedExperiment-method
** Examples
example_sce <- mockSCE()
example_sce <- logNormCounts(example_sce)
example_sce <- runUMAP(example_sce)
Error in irlba::irlba(L, nv = n, nu = 0, maxit = iters) :
function 'as_cholmod_sparse' not provided by package 'Matrix'
Calls: runUMAP ... irlba_tsvd_normalized_laplacian_init -> irlba_spectral_tsvd
Execution halted
```
-
checking tests ...
``
Running ‘testthat.R’
ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
4. └─scater (local) .local(x, ...)
5. └─scater:::.calculate_umap(...)
6. ├─base::do.call(uwot::umap, args)
7. └─uwot (local)`(...)
8. └─uwot:::uwot(...)
9. └─uwot:::spectral_init(V, ndim = n_components, verbose = verbose)
- └─uwot:::irlba_tsvd_normalized_laplacian_init(A, ndim, verbose = FALSE)
- └─uwot:::irlba_spectral_tsvd(L, ndim + 1)
- ├─base::suppressWarnings(...)
- │ └─base::withCallingHandlers(...)
- └─irlba::irlba(L, nv = n, nu = 0, maxit = iters)
[ FAIL 14 | WARN 30 | SKIP 0 | PASS 768 ]
Error: Test failures
Execution halted
```
-
checking installed package size ... NOTE
installed size is 6.1Mb
sub-directories of 1Mb or more:
doc 5.5Mb
scUtils
- Version: 0.1.0
- GitHub: NA
- Source code: https://github.com/cran/scUtils
- Date/Publication: 2020-06-25 16:20:02 UTC
- Number of recursive dependencies: 52
Run revdepcheck::revdep_details(, "scUtils") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
SIBER
- Version: 2.1.9
- GitHub: NA
- Source code: https://github.com/cran/SIBER
- Date/Publication: 2023-10-19 09:30:02 UTC
- Number of recursive dependencies: 81
Run revdepcheck::revdep_details(, "SIBER") for more info
In both
-
checking examples ... ERROR
```
Running examples in ‘SIBER-Ex.R’ failed
The error most likely occurred in:
Name: fitEllipse
Title: Fit a multivariate normal distribution to x and y data using
jags
Aliases: fitEllipse
** Examples
...
priors$k <- 2
priors$tau.mu <- 1.0E-3
fitEllipse(x, y, parms, priors)
Error: .onLoad failed in loadNamespace() for 'rjags', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/SIBER/rjags/libs/rjags.so':
dlopen(/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/SIBER/rjags/libs/rjags.so, 0x000A): Library not loaded: /usr/local/lib/libjags.4.dylib
Referenced from: <621A7307-C96A-3A25-BE2B-B9C2339518AE> /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/SIBER/rjags/libs/rjags.so
Reason: tried: '/usr/local/lib/libjags.4.dylib' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/usr/local/lib/libjags.4.dylib' (no such file), '/usr/local/lib/libjags.4.dylib' (no such file), '/Library/Frameworks/R.framework/Versions/4.3-arm64/Resourc
Execution halted
```
simmr
- Version: 0.5.1.216
- GitHub: https://github.com/andrewcparnell/simmr
- Source code: https://github.com/cran/simmr
- Date/Publication: 2023-10-27 14:20:02 UTC
- Number of recursive dependencies: 129
Run revdepcheck::revdep_details(, "simmr") for more info
In both
- checking whether package ‘simmr’ can be installed ... ERROR
Installation failed.
See ‘/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/new/simmr.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘simmr’ ...
** package ‘simmr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using SDK: ‘MacOSX14.2.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/include" -DNDEBUG -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/Rcpp/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppArmadillo/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppDist/include' -I/opt/homebrew/include -fPIC -I/opt/homebrew/include -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/include" -DNDEBUG -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/Rcpp/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppArmadillo/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppDist/include' -I/opt/homebrew/include -fPIC -I/opt/homebrew/include -c run_VB.cpp -o run_VB.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -L/opt/homebrew/lib -o simmr.so RcppExports.o run_VB.o -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -lRblas -L/opt/homebrew/opt/gfortran/lib -F/Library/Frameworks/R.framework/Versions/4.3-arm64 -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/new/simmr.Rcheck/00LOCK-simmr/00new/simmr/libs
...
Error: package or namespace load failed for ‘rjags’:
.onLoad failed in loadNamespace() for 'rjags', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so':
dlopen(/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so, 0x000A): Library not loaded: /usr/local/lib/libjags.4.dylib
Referenced from: <621A7307-C96A-3A25-BE2B-B9C2339518AE> /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so
Reason: tried: '/usr/local/lib/libjags.4.dylib' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/usr/local/lib/libjags.4.dylib' (no such file), '/usr/local/lib/libjags.4.dylib' (no such file), '/Librar
Execution halted
ERROR: lazy loading failed for package ‘simmr’
* removing ‘/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/new/simmr.Rcheck/simmr’
CRAN
* installing *source* package ‘simmr’ ...
** package ‘simmr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using SDK: ‘MacOSX14.2.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/include" -DNDEBUG -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/Rcpp/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppArmadillo/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppDist/include' -I/opt/homebrew/include -fPIC -I/opt/homebrew/include -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/include" -DNDEBUG -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/Rcpp/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppArmadillo/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppDist/include' -I/opt/homebrew/include -fPIC -I/opt/homebrew/include -c run_VB.cpp -o run_VB.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -L/opt/homebrew/lib -o simmr.so RcppExports.o run_VB.o -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -lRblas -L/opt/homebrew/opt/gfortran/lib -F/Library/Frameworks/R.framework/Versions/4.3-arm64 -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/old/simmr.Rcheck/00LOCK-simmr/00new/simmr/libs
...
Error: package or namespace load failed for ‘rjags’:
.onLoad failed in loadNamespace() for 'rjags', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so':
dlopen(/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so, 0x000A): Library not loaded: /usr/local/lib/libjags.4.dylib
Referenced from: <621A7307-C96A-3A25-BE2B-B9C2339518AE> /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so
Reason: tried: '/usr/local/lib/libjags.4.dylib' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/usr/local/lib/libjags.4.dylib' (no such file), '/usr/local/lib/libjags.4.dylib' (no such file), '/Librar
Execution halted
ERROR: lazy loading failed for package ‘simmr’
* removing ‘/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/old/simmr.Rcheck/simmr’
simplevis
- Version: 7.1.0
- GitHub: https://github.com/StatisticsNZ/simplevis
- Source code: https://github.com/cran/simplevis
- Date/Publication: 2023-05-09 04:00:02 UTC
- Number of recursive dependencies: 130
Run revdepcheck::revdep_details(, "simplevis") for more info
In both
-
checking package dependencies ... ERROR
```
Packages suggested but not available: 'rgdal', 'rgeos'
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
SimSurvey
- Version: 0.1.6
- GitHub: https://github.com/PaulRegular/SimSurvey
- Source code: https://github.com/cran/SimSurvey
- Date/Publication: 2023-09-19 10:50:10 UTC
- Number of recursive dependencies: 126
Run revdepcheck::revdep_details(, "SimSurvey") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
skpr
- Version: 1.6.1
- GitHub: https://github.com/tylermorganwall/skpr
- Source code: https://github.com/cran/skpr
- Date/Publication: 2023-12-07 16:50:02 UTC
- Number of recursive dependencies: 149
Run revdepcheck::revdep_details(, "skpr") for more info
In both
- checking installed package size ... NOTE
installed size is 6.4Mb
sub-directories of 1Mb or more:
libs 5.8Mb
SPARSEMODr
- Version: 1.2.0
- GitHub: https://github.com/NAU-CCL/SPARSEMODr
- Source code: https://github.com/cran/SPARSEMODr
- Date/Publication: 2022-07-19 20:50:02 UTC
- Number of recursive dependencies: 127
Run revdepcheck::revdep_details(, "SPARSEMODr") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
‘future’ ‘geosphere’ ‘lubridate’ ‘tidyverse’ ‘viridis’
All declared Imports should be used.
spatialrisk
- Version: 0.7.0
- GitHub: https://github.com/mharinga/spatialrisk
- Source code: https://github.com/cran/spatialrisk
- Date/Publication: 2021-11-10 15:30:02 UTC
- Number of recursive dependencies: 134
Run revdepcheck::revdep_details(, "spatialrisk") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 283 marked UTF-8 strings
spectralAnalysis
- Version: 4.3.1
- GitHub: NA
- Source code: https://github.com/cran/spectralAnalysis
- Date/Publication: 2023-01-11 10:00:02 UTC
- Number of recursive dependencies: 119
Run revdepcheck::revdep_details(, "spectralAnalysis") for more info
In both
- checking installed package size ... NOTE
installed size is 6.2Mb
sub-directories of 1Mb or more:
doc 4.8Mb
SPUTNIK
- Version: 1.4.1
- GitHub: https://github.com/paoloinglese/SPUTNIK
- Source code: https://github.com/cran/SPUTNIK
- Date/Publication: 2022-11-24 10:00:06 UTC
- Number of recursive dependencies: 88
Run revdepcheck::revdep_details(, "SPUTNIK") for more info
In both
-
checking tests ...
```
Running ‘test_constructors.R’
Running ‘test_csr_filter.R’
ERROR
Running the tests in ‘tests/test_csr_filter.R’ failed.
Last 13 lines of output:
── Failure: CSR filter ─────────────────────────────────────────────────────────
length(csrFiltCE$sel.peaks) not equal to 83.
1/1 mismatches
[1] 89 - 83 == 6
...
Error:
! Test failed
Backtrace:
▆
1. ├─testthat::test_that(...)
2. │ └─withr (local) <fn>()
3. └─reporter$stop_if_needed()
4. └─rlang::abort("Test failed", call = NULL)
Execution halted
```
stacomiR
- Version: 0.6.0.7
- GitHub: https://github.com/MarionLegrandLogrami/stacomiR
- Source code: https://github.com/cran/stacomiR
- Date/Publication: 2022-07-18 09:20:02 UTC
- Number of recursive dependencies: 102
Run revdepcheck::revdep_details(, "stacomiR") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 40748 marked UTF-8 strings
stars
- Version: 0.6-4
- GitHub: https://github.com/r-spatial/stars
- Source code: https://github.com/cran/stars
- Date/Publication: 2023-09-11 11:50:02 UTC
- Number of recursive dependencies: 164
Run revdepcheck::revdep_details(, "stars") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘starsdata’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
StratifiedSampling
- Version: 0.4.1
- GitHub: https://github.com/RJauslin/StratifiedSampling
- Source code: https://github.com/cran/StratifiedSampling
- Date/Publication: 2022-10-26 10:55:08 UTC
- Number of recursive dependencies: 128
Run revdepcheck::revdep_details(, "StratifiedSampling") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘rgeos’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
SUMMER
- Version: 1.3.0
- GitHub: https://github.com/richardli/SUMMER
- Source code: https://github.com/cran/SUMMER
- Date/Publication: 2022-07-08 08:50:06 UTC
- Number of recursive dependencies: 140
Run revdepcheck::revdep_details(, "SUMMER") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
surveyvoi
- Version: 1.0.5
- GitHub: https://github.com/prioritizr/surveyvoi
- Source code: https://github.com/cran/surveyvoi
- Date/Publication: 2022-09-17 19:56:11 UTC
- Number of recursive dependencies: 118
Run revdepcheck::revdep_details(, "surveyvoi") for more info
In both
-
checking package dependencies ... ERROR
```
Package suggested but not available: ‘gurobi’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
```
tectonicr
- Version: 0.2.95
- GitHub: https://github.com/tobiste/tectonicr
- Source code: https://github.com/cran/tectonicr
- Date/Publication: 2023-11-02 04:10:02 UTC
- Number of recursive dependencies: 110
Run revdepcheck::revdep_details(, "tectonicr") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 56 marked UTF-8 strings
troopdata
- Version: 0.1.5
- GitHub: https://github.com/meflynn/troopdata
- Source code: https://github.com/cran/troopdata
- Date/Publication: 2022-01-31 22:00:02 UTC
- Number of recursive dependencies: 93
Run revdepcheck::revdep_details(, "troopdata") for more info
In both
-
checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘tibble’
All declared Imports should be used.
-
checking data for non-ASCII characters ... NOTE
Note: found 1 marked UTF-8 string
TSstudio
- Version: 0.1.7
- GitHub: https://github.com/RamiKrispin/TSstudio
- Source code: https://github.com/cran/TSstudio
- Date/Publication: 2023-08-09 04:40:07 UTC
- Number of recursive dependencies: 152
Run revdepcheck::revdep_details(, "TSstudio") for more info
In both
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘forecastHybrid’
All declared Imports should be used.
xQTLbiolinks
- Version: 1.2.2
- GitHub: https://github.com/dingruofan/xQTLbiolinks
- Source code: https://github.com/cran/xQTLbiolinks
- Date/Publication: 2022-08-27 13:50:02 UTC
- Number of recursive dependencies: 137
Run revdepcheck::revdep_details(, "xQTLbiolinks") for more info
In both
-
checking examples ... ERROR
```
Running examples in ‘xQTLbiolinks-Ex.R’ failed
The error most likely occurred in:
Name: xQTLanalyze_TSExp
Title: Perform tissue-specific expression analysis for genes.
Aliases: xQTLanalyze_TSExp
** Examples
TSgene <- xQTLanalyze_TSExp(extractGeneInfo(gencodeGeneInfoAllGranges)$gencodeId[1:5])
== Check the gene name:
Error: lexical error: invalid char in json text.
<!DOCTYPE html> <html lang="en"
(right here) ------^
Execution halted
```
sjmgarnier/viridis documentation built on Feb. 7, 2024, 12:50 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
aweSOM
- Version: 1.3
- GitHub: NA
- Source code: https://github.com/cran/aweSOM
- Date/Publication: 2022-08-30 15:40:02 UTC
- Number of recursive dependencies: 98
Run revdepcheck::revdep_details(, "aweSOM") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from: ‘DT’ ‘bslib’ ‘rclipboard’ ‘rmarkdown’ All declared Imports should be used.
bangladesh
- Version: 1.0.0
- GitHub: NA
- Source code: https://github.com/cran/bangladesh
- Date/Publication: 2022-10-28 16:30:05 UTC
- Number of recursive dependencies: 93
Run revdepcheck::revdep_details(, "bangladesh") for more info
In both
- checking installed package size ... NOTE
installed size is 5.7Mb sub-directories of 1Mb or more: data 4.9Mb
baRulho
- Version: 1.0.6
- GitHub: https://github.com/maRce10/baRulho
- Source code: https://github.com/cran/baRulho
- Date/Publication: 2022-03-01 21:40:05 UTC
- Number of recursive dependencies: 91
Run revdepcheck::revdep_details(, "baRulho") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘Rraven’
bayesvl
- Version: 0.8.5
- GitHub: https://github.com/sshpa/bayesvl
- Source code: https://github.com/cran/bayesvl
- Date/Publication: 2019-05-24 13:40:06 UTC
- Number of recursive dependencies: 65
Run revdepcheck::revdep_details(, "bayesvl") for more info
In both
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘dplyr’ All declared Imports should be used.
bioRad
- Version: 0.7.3
- GitHub: https://github.com/adokter/bioRad
- Source code: https://github.com/cran/bioRad
- Date/Publication: 2023-10-20 11:00:07 UTC
- Number of recursive dependencies: 131
Run revdepcheck::revdep_details(, "bioRad") for more info
In both
- checking installed package size ... NOTE
installed size is 5.6Mb sub-directories of 1Mb or more: data 1.6Mb extdata 2.0Mb
c3
- Version: 0.3.0
- GitHub: https://github.com/mrjoh3/c3
- Source code: https://github.com/cran/c3
- Date/Publication: 2020-03-16 13:30:08 UTC
- Number of recursive dependencies: 75
Run revdepcheck::revdep_details(, "c3") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
catmaply
- Version: 0.9.3
- GitHub: https://github.com/VerkehrsbetriebeZuerich/catmaply
- Source code: https://github.com/cran/catmaply
- Date/Publication: 2023-01-05 19:20:02 UTC
- Number of recursive dependencies: 125
Run revdepcheck::revdep_details(, "catmaply") for more info
In both
- checking installed package size ... NOTE
installed size is 38.0Mb sub-directories of 1Mb or more: doc 37.7Mb
chronicle
- Version: 0.3
- GitHub: NA
- Source code: https://github.com/cran/chronicle
- Date/Publication: 2021-06-25 05:00:02 UTC
- Number of recursive dependencies: 146
Run revdepcheck::revdep_details(, "chronicle") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from: ‘DT’ ‘dplyr’ ‘prettydoc’ ‘rmdformats’ ‘skimr’ All declared Imports should be used.
CIDER
- Version: 0.99.1
- GitHub: https://github.com/zhiyhu/CIDER
- Source code: https://github.com/cran/CIDER
- Date/Publication: 2022-09-19 03:16:07 UTC
- Number of recursive dependencies: 169
Run revdepcheck::revdep_details(, "CIDER") for more info
In both
- checking whether package ‘CIDER’ can be installed ... WARNING
Found the following significant warnings: Warning: replacing previous import ‘Seurat::components’ by ‘igraph::components’ when loading ‘CIDER’ See ‘/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/CIDER/new/CIDER.Rcheck/00install.out’ for details.
CINNA
- Version: 1.2.2
- GitHub: NA
- Source code: https://github.com/cran/CINNA
- Date/Publication: 2023-08-08 16:40:02 UTC
- Number of recursive dependencies: 149
Run revdepcheck::revdep_details(, "CINNA") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from: ‘circlize’ ‘utils’ All declared Imports should be used.
clustMD
- Version: 1.2.1
- GitHub: NA
- Source code: https://github.com/cran/clustMD
- Date/Publication: 2017-05-08 17:19:20 UTC
- Number of recursive dependencies: 41
Run revdepcheck::revdep_details(, "clustMD") for more info
In both
- checking Rd files ... NOTE
checkRd: (-1) dtmvnom.Rd:30: Escaped LaTeX specials: \&
CoordinateCleaner
- Version: 3.0.1
- GitHub: https://github.com/ropensci/CoordinateCleaner
- Source code: https://github.com/cran/CoordinateCleaner
- Date/Publication: 2023-10-24 21:20:02 UTC
- Number of recursive dependencies: 107
Run revdepcheck::revdep_details(, "CoordinateCleaner") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 144 marked UTF-8 strings
countries
- Version: 1.2.0
- GitHub: https://github.com/fbellelli/countries
- Source code: https://github.com/cran/countries
- Date/Publication: 2024-01-21 11:02:46 UTC
- Number of recursive dependencies: 84
Run revdepcheck::revdep_details(, "countries") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 9044 marked UTF-8 strings
dartR.base
- Version: 0.65
- GitHub: NA
- Source code: https://github.com/cran/dartR.base
- Date/Publication: 2023-11-17 20:00:08 UTC
- Number of recursive dependencies: 269
Run revdepcheck::revdep_details(, "dartR.base") for more info
In both
- checking installed package size ... NOTE
installed size is 5.1Mb sub-directories of 1Mb or more: R 2.0Mb help 2.2Mb
DataVisualizations
- Version: 1.3.2
- GitHub: https://github.com/Mthrun/DataVisualizations
- Source code: https://github.com/cran/DataVisualizations
- Date/Publication: 2023-10-10 08:10:02 UTC
- Number of recursive dependencies: 155
Run revdepcheck::revdep_details(, "DataVisualizations") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘FCPS’
dendextend
- Version: 1.17.1
- GitHub: https://github.com/talgalili/dendextend
- Source code: https://github.com/cran/dendextend
- Date/Publication: 2023-03-25 12:50:10 UTC
- Number of recursive dependencies: 132
Run revdepcheck::revdep_details(, "dendextend") for more info
In both
-
checking package dependencies ... NOTE
Packages which this enhances but not available for checking: 'ggdendro', 'dendroextras', 'Hmisc', 'WGCNA', 'moduleColor', 'distory', 'phangorn', 'zoo' -
checking installed package size ... NOTE
installed size is 5.4Mb sub-directories of 1Mb or more: doc 4.2Mb -
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘WGCNA’, ‘dendroextras’, ‘moduleColor’, ‘distory’, ‘phangorn’, ‘ggdendro’, ‘zoo’
DiagrammeR
- Version: 1.0.10
- GitHub: https://github.com/rich-iannone/DiagrammeR
- Source code: https://github.com/cran/DiagrammeR
- Date/Publication: 2023-05-18 14:30:07 UTC
- Number of recursive dependencies: 100
Run revdepcheck::revdep_details(, "DiagrammeR") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 1 marked UTF-8 string
DSjobtracker
- Version: 2.0.0
- GitHub: https://github.com/thiyangt/DSjobtracker
- Source code: https://github.com/cran/DSjobtracker
- Date/Publication: 2023-12-09 07:40:02 UTC
- Number of recursive dependencies: 77
Run revdepcheck::revdep_details(, "DSjobtracker") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 386 marked UTF-8 strings
dynaSpec
- Version: 1.0.1
- GitHub: https://github.com/maRce10/dynaSpec
- Source code: https://github.com/cran/dynaSpec
- Date/Publication: 2021-03-10 00:00:05 UTC
- Number of recursive dependencies: 102
Run revdepcheck::revdep_details(, "dynaSpec") for more info
In both
-
checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from: ‘NatureSounds’ ‘av’ ‘magrittr’ ‘stats’ All declared Imports should be used. -
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘warbleR’
eclust
- Version: 0.1.0
- GitHub: https://github.com/sahirbhatnagar/eclust
- Source code: https://github.com/cran/eclust
- Date/Publication: 2017-01-26 12:08:12
- Number of recursive dependencies: 209
Run revdepcheck::revdep_details(, "eclust") for more info
In both
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘pander’ All declared Imports should be used.
ecotraj
- Version: 0.1.1
- GitHub: NA
- Source code: https://github.com/cran/ecotraj
- Date/Publication: 2023-10-30 17:10:02 UTC
- Number of recursive dependencies: 169
Run revdepcheck::revdep_details(, "ecotraj") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 42 marked UTF-8 strings
eesim
- Version: 0.1.0
- GitHub: https://github.com/sakoehler7/eesim
- Source code: https://github.com/cran/eesim
- Date/Publication: 2017-06-03 17:55:52 UTC
- Number of recursive dependencies: 64
Run revdepcheck::revdep_details(, "eesim") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
effectR
- Version: 1.0.2
- GitHub: NA
- Source code: https://github.com/cran/effectR
- Date/Publication: 2018-09-30 21:30:03 UTC
- Number of recursive dependencies: 84
Run revdepcheck::revdep_details(, "effectR") for more info
In both
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘rmarkdown’ All declared Imports should be used.
EHRtemporalVariability
- Version: 1.2.1
- GitHub: https://github.com/hms-dbmi/EHRtemporalVariability
- Source code: https://github.com/cran/EHRtemporalVariability
- Date/Publication: 2024-01-26 13:50:06 UTC
- Number of recursive dependencies: 130
Run revdepcheck::revdep_details(, "EHRtemporalVariability") for more info
In both
- checking installed package size ... NOTE
installed size is 10.4Mb sub-directories of 1Mb or more: doc 5.1Mb extdata 5.1Mb
eiExpand
- Version: 1.0.5
- GitHub: NA
- Source code: https://github.com/cran/eiExpand
- Date/Publication: 2023-03-14 18:50:08 UTC
- Number of recursive dependencies: 100
Run revdepcheck::revdep_details(, "eiExpand") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 1 marked UTF-8 string
escalation
- Version: 0.1.5
- GitHub: NA
- Source code: https://github.com/cran/escalation
- Date/Publication: 2023-05-29 18:10:02 UTC
- Number of recursive dependencies: 127
Run revdepcheck::revdep_details(, "escalation") for more info
In both
- checking installed package size ... NOTE
installed size is 13.7Mb sub-directories of 1Mb or more: doc 13.1Mb
fastai
- Version: 2.2.1
- GitHub: https://github.com/EagerAI/fastai
- Source code: https://github.com/cran/fastai
- Date/Publication: 2023-03-12 00:10:02 UTC
- Number of recursive dependencies: 110
Run revdepcheck::revdep_details(, "fastai") for more info
In both
- checking installed package size ... NOTE
installed size is 5.2Mb sub-directories of 1Mb or more: doc 2.9Mb help 1.3Mb
FielDHub
- Version: 1.3.4
- GitHub: https://github.com/DidierMurilloF/FielDHub
- Source code: https://github.com/cran/FielDHub
- Date/Publication: 2023-10-19 21:20:02 UTC
- Number of recursive dependencies: 118
Run revdepcheck::revdep_details(, "FielDHub") for more info
In both
- checking installed package size ... NOTE
installed size is 7.0Mb sub-directories of 1Mb or more: R 2.0Mb doc 3.0Mb help 1.1Mb
fitbitViz
- Version: 1.0.5
- GitHub: https://github.com/mlampros/fitbitViz
- Source code: https://github.com/cran/fitbitViz
- Date/Publication: 2023-01-06 15:30:02 UTC
- Number of recursive dependencies: 150
Run revdepcheck::revdep_details(, "fitbitViz") for more info
In both
- checking installed package size ... NOTE
installed size is 6.0Mb sub-directories of 1Mb or more: doc 4.3Mb
fitODBOD
- Version: 1.5.0
- GitHub: https://github.com/Amalan-ConStat/fitODBOD
- Source code: https://github.com/cran/fitODBOD
- Date/Publication: 2023-01-15 11:40:06 UTC
- Number of recursive dependencies: 113
Run revdepcheck::revdep_details(, "fitODBOD") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘extraDistr’
foodingraph
- Version: 0.1.0
- GitHub: https://github.com/vgasque/foodingraph
- Source code: https://github.com/cran/foodingraph
- Date/Publication: 2019-10-06 11:30:08 UTC
- Number of recursive dependencies: 60
Run revdepcheck::revdep_details(, "foodingraph") for more info
In both
-
checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘grid’ All declared Imports should be used. -
checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
forestr
- Version: 2.0.2
- GitHub: https://github.com/atkinsjeff/forestr
- Source code: https://github.com/cran/forestr
- Date/Publication: 2020-04-14 19:20:05 UTC
- Number of recursive dependencies: 63
Run revdepcheck::revdep_details(, "forestr") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from: ‘tibble’ ‘viridis’ All declared Imports should be used.
geocmeans
- Version: 0.3.4
- GitHub: https://github.com/JeremyGelb/geocmeans
- Source code: https://github.com/cran/geocmeans
- Date/Publication: 2023-09-12 03:10:02 UTC
- Number of recursive dependencies: 194
Run revdepcheck::revdep_details(, "geocmeans") for more info
In both
- checking installed package size ... NOTE
installed size is 5.8Mb sub-directories of 1Mb or more: extdata 3.0Mb
geouy
- Version: 0.2.8
- GitHub: https://github.com/RichDeto/geouy
- Source code: https://github.com/cran/geouy
- Date/Publication: 2023-08-23 15:10:02 UTC
- Number of recursive dependencies: 104
Run revdepcheck::revdep_details(, "geouy") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 64 marked Latin-1 strings Note: found 25 marked UTF-8 strings
ggpointdensity
- Version: 0.1.0
- GitHub: https://github.com/LKremer/ggpointdensity
- Source code: https://github.com/cran/ggpointdensity
- Date/Publication: 2019-08-28 14:30:02 UTC
- Number of recursive dependencies: 33
Run revdepcheck::revdep_details(, "ggpointdensity") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
ggraph
- Version: 2.1.0
- GitHub: https://github.com/thomasp85/ggraph
- Source code: https://github.com/cran/ggraph
- Date/Publication: 2022-10-09 20:33:19 UTC
- Number of recursive dependencies: 100
Run revdepcheck::revdep_details(, "ggraph") for more info
In both
-
checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential -
checking installed package size ... NOTE
installed size is 5.7Mb sub-directories of 1Mb or more: doc 3.5Mb
glmmfields
- Version: 0.1.8
- GitHub: https://github.com/seananderson/glmmfields
- Source code: https://github.com/cran/glmmfields
- Date/Publication: 2023-10-20 17:50:02 UTC
- Number of recursive dependencies: 109
Run revdepcheck::revdep_details(, "glmmfields") for more info
In both
- checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
gwpcormapper
- Version: 0.1.3
- GitHub: https://github.com/gwpcor/gwpcormapper
- Source code: https://github.com/cran/gwpcormapper
- Date/Publication: 2021-12-09 16:00:02 UTC
- Number of recursive dependencies: 117
Run revdepcheck::revdep_details(, "gwpcormapper") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from: ‘DT’ ‘attempt’ ‘corpcor’ ‘glue’ ‘htmltools’ ‘pkgload’ ‘processx’ ‘tools’ All declared Imports should be used.
heatmaply
- Version: 1.5.0
- GitHub: https://github.com/talgalili/heatmaply
- Source code: https://github.com/cran/heatmaply
- Date/Publication: 2023-10-06 20:50:02 UTC
- Number of recursive dependencies: 112
Run revdepcheck::revdep_details(, "heatmaply") for more info
In both
- checking installed package size ... NOTE
installed size is 5.5Mb sub-directories of 1Mb or more: doc 5.1Mb
Hmisc
- Version: 5.1-1
- GitHub: NA
- Source code: https://github.com/cran/Hmisc
- Date/Publication: 2023-09-12 12:52:37 UTC
- Number of recursive dependencies: 182
Run revdepcheck::revdep_details(, "Hmisc") for more info
In both
- checking R code for possible problems ... NOTE
html_describe_con: multiple local function definitions for ‘g’ with different formal arguments
httk
- Version: 2.3.0
- GitHub: https://github.com/USEPA/CompTox-ExpoCast-httk
- Source code: https://github.com/cran/httk
- Date/Publication: 2023-12-08 18:50:02 UTC
- Number of recursive dependencies: 108
Run revdepcheck::revdep_details(, "httk") for more info
In both
- checking installed package size ... NOTE
installed size is 6.6Mb sub-directories of 1Mb or more: data 2.2Mb doc 2.3Mb help 1.1Mb
industRial
- Version: 0.1.0
- GitHub: https://github.com/J-Ramalho/industRial
- Source code: https://github.com/cran/industRial
- Date/Publication: 2021-06-11 09:40:02 UTC
- Number of recursive dependencies: 187
Run revdepcheck::revdep_details(, "industRial") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 2 marked UTF-8 strings
intSDM
- Version: 2.0.2
- GitHub: NA
- Source code: https://github.com/cran/intSDM
- Date/Publication: 2023-10-20 09:00:04 UTC
- Number of recursive dependencies: 140
Run revdepcheck::revdep_details(, "intSDM") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
IOHanalyzer
- Version: 0.1.8.6
- GitHub: https://github.com/IOHprofiler/IOHAnalyzer
- Source code: https://github.com/cran/IOHanalyzer
- Date/Publication: 2023-12-04 14:30:07 UTC
- Number of recursive dependencies: 141
Run revdepcheck::revdep_details(, "IOHanalyzer") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 102 marked UTF-8 strings
iSEE
- Version: 2.14.0
- GitHub: https://github.com/iSEE/iSEE
- Source code: https://github.com/cran/iSEE
- Date/Publication: 2023-10-24
- Number of recursive dependencies: 212
Run revdepcheck::revdep_details(, "iSEE") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘scRNAseq’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
leri
- Version: 0.0.1
- GitHub: https://github.com/earthlab/leri
- Source code: https://github.com/cran/leri
- Date/Publication: 2019-09-09 11:00:02 UTC
- Number of recursive dependencies: 92
Run revdepcheck::revdep_details(, "leri") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘maptools’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
lineartestr
- Version: 1.0.0
- GitHub: https://github.com/FedericoGarza/lineartestr
- Source code: https://github.com/cran/lineartestr
- Date/Publication: 2020-06-12 09:10:20 UTC
- Number of recursive dependencies: 81
Run revdepcheck::revdep_details(, "lineartestr") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
memoria
- Version: 1.0.0
- GitHub: NA
- Source code: https://github.com/cran/memoria
- Date/Publication: 2019-05-17 08:00:02 UTC
- Number of recursive dependencies: 157
Run revdepcheck::revdep_details(, "memoria") for more info
In both
- checking package subdirectories ... NOTE
Problems with news in ‘NEWS.md’: No news entries found.
metaGE
- Version: 1.0.3
- GitHub: NA
- Source code: https://github.com/cran/metaGE
- Date/Publication: 2023-09-28 08:50:02 UTC
- Number of recursive dependencies: 149
Run revdepcheck::revdep_details(, "metaGE") for more info
In both
- checking installed package size ... NOTE
installed size is 5.2Mb sub-directories of 1Mb or more: data 4.2Mb
MetricGraph
- Version: 1.2.0
- GitHub: https://github.com/davidbolin/MetricGraph
- Source code: https://github.com/cran/MetricGraph
- Date/Publication: 2023-11-07 10:10:16 UTC
- Number of recursive dependencies: 128
Run revdepcheck::revdep_details(, "MetricGraph") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
mobirep
- Version: 0.2.3
- GitHub: NA
- Source code: https://github.com/cran/mobirep
- Date/Publication: 2021-04-22 14:00:09 UTC
- Number of recursive dependencies: 98
Run revdepcheck::revdep_details(, "mobirep") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘geomorph’
moderndive
- Version: 0.5.5
- GitHub: https://github.com/moderndive/moderndive
- Source code: https://github.com/cran/moderndive
- Date/Publication: 2022-12-01 22:20:02 UTC
- Number of recursive dependencies: 108
Run revdepcheck::revdep_details(, "moderndive") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 5238 marked UTF-8 strings
myClim
- Version: 1.0.12
- GitHub: https://github.com/ibot-geoecology/myClim
- Source code: https://github.com/cran/myClim
- Date/Publication: 2023-11-16 22:00:02 UTC
- Number of recursive dependencies: 107
Run revdepcheck::revdep_details(, "myClim") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘rTubeDB’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
noaastormevents
- Version: 0.2.0
- GitHub: https://github.com/geanders/noaastormevents
- Source code: https://github.com/cran/noaastormevents
- Date/Publication: 2021-01-21 10:20:06 UTC
- Number of recursive dependencies: 138
Run revdepcheck::revdep_details(, "noaastormevents") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘hurricaneexposuredata’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
nullabor
- Version: 0.3.9
- GitHub: https://github.com/dicook/nullabor
- Source code: https://github.com/cran/nullabor
- Date/Publication: 2020-02-25 21:50:02 UTC
- Number of recursive dependencies: 79
Run revdepcheck::revdep_details(, "nullabor") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from: ‘forecast’ ‘rlang’ ‘tsibble’ ‘viridis’ All declared Imports should be used.
occCite
- Version: 0.5.6
- GitHub: https://github.com/ropensci/occCite
- Source code: https://github.com/cran/occCite
- Date/Publication: 2022-08-05 11:40:02 UTC
- Number of recursive dependencies: 179
Run revdepcheck::revdep_details(, "occCite") for more info
In both
-
checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘httr’ All declared Imports should be used. -
checking data for non-ASCII characters ... NOTE
Note: found 7 marked UTF-8 strings
ohun
- Version: 1.0.1
- GitHub: https://github.com/ropensci/ohun
- Source code: https://github.com/cran/ohun
- Date/Publication: 2023-11-17 11:30:02 UTC
- Number of recursive dependencies: 101
Run revdepcheck::revdep_details(, "ohun") for more info
In both
- checking installed package size ... NOTE
installed size is 6.8Mb sub-directories of 1Mb or more: doc 6.1Mb
pdSpecEst
- Version: 1.2.4
- GitHub: https://github.com/JorisChau/pdSpecEst
- Source code: https://github.com/cran/pdSpecEst
- Date/Publication: 2020-01-08 09:10:07 UTC
- Number of recursive dependencies: 89
Run revdepcheck::revdep_details(, "pdSpecEst") for more info
In both
-
checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential -
checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
permutes
- Version: 2.8
- GitHub: NA
- Source code: https://github.com/cran/permutes
- Date/Publication: 2023-09-28 14:00:02 UTC
- Number of recursive dependencies: 103
Run revdepcheck::revdep_details(, "permutes") for more info
In both
-
checking examples ... ERROR ``` Running examples in ‘permutes-Ex.R’ failed The error most likely occurred in:
Name: clusterperm.lmer
Title: Cluster-based permutation tests for time series data, based on
mixed-effects models or other 'buildmer' models.
Aliases: clusterperm.lmer
** Examples
... object 'unpackedMatrix_diag_get' not found Warning in diag(from, names = FALSE) : object 'unpackedMatrix_diag_get' not found Error in diag(from, names = FALSE) : object 'unpackedMatrix_diag_get' not found Warning in diag(from, names = FALSE) : object 'unpackedMatrix_diag_get' not found Error in
*tmp*[[i]] : subscript out of bounds Calls: clusterperm.lmer -> clusterperm.work Execution halted ```
Platypus
- Version: 3.4.1
- GitHub: NA
- Source code: https://github.com/cran/Platypus
- Date/Publication: 2022-08-15 07:20:20 UTC
- Number of recursive dependencies: 359
Run revdepcheck::revdep_details(, "Platypus") for more info
In both
-
checking package dependencies ... ERROR ``` Packages suggested but not available: 'ggseqlogo', 'Matrix.utils', 'monocle3', 'ProjecTILs', 'SeuratWrappers', 'vanddraabe'
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
prioriactions
- Version: 0.5.0
- GitHub: https://github.com/prioriactions/prioriactions
- Source code: https://github.com/cran/prioriactions
- Date/Publication: 2023-08-13 12:40:02 UTC
- Number of recursive dependencies: 135
Run revdepcheck::revdep_details(, "prioriactions") for more info
In both
-
checking package dependencies ... ERROR ``` Packages suggested but not available: 'gurobi', 'Rcplex', 'rcbc'
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
qreport
- Version: 1.0-0
- GitHub: NA
- Source code: https://github.com/cran/qreport
- Date/Publication: 2023-09-12 22:10:02 UTC
- Number of recursive dependencies: 78
Run revdepcheck::revdep_details(, "qreport") for more info
In both
- checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘mice’
RcmdrPlugin.BiclustGUI
- Version: 1.1.3.1
- GitHub: NA
- Source code: https://github.com/cran/RcmdrPlugin.BiclustGUI
- Date/Publication: 2022-05-23 13:03:37 UTC
- Number of recursive dependencies: 191
Run revdepcheck::revdep_details(, "RcmdrPlugin.BiclustGUI") for more info
In both
- checking package dependencies ... NOTE
Depends: includes the non-default packages: 'biclust', 'fabia', 'iBBiG', 'superbiclust', 'BcDiag', 'BicARE', 's4vd', 'BiBitR' Adding so many packages to the search path is excessive and importing selectively is preferable.
rcontroll
- Version: 0.1.1
- GitHub: https://github.com/sylvainschmitt/rcontroll
- Source code: https://github.com/cran/rcontroll
- Date/Publication: 2023-09-07 08:40:02 UTC
- Number of recursive dependencies: 129
Run revdepcheck::revdep_details(, "rcontroll") for more info
In both
-
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘nominatimlite’, ‘lutz’ -
checking data for non-ASCII characters ... NOTE
Note: found 1 marked UTF-8 string
reinsureR
- Version: 0.1.0
- GitHub: NA
- Source code: https://github.com/cran/reinsureR
- Date/Publication: 2018-02-20 19:07:33 UTC
- Number of recursive dependencies: 34
Run revdepcheck::revdep_details(, "reinsureR") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
rfars
- Version: 0.3.0
- GitHub: https://github.com/s87jackson/rfars
- Source code: https://github.com/cran/rfars
- Date/Publication: 2023-05-05 09:40:02 UTC
- Number of recursive dependencies: 92
Run revdepcheck::revdep_details(, "rfars") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 806 marked UTF-8 strings
rKOMICS
- Version: 1.3
- GitHub: NA
- Source code: https://github.com/cran/rKOMICS
- Date/Publication: 2023-06-29 22:40:03 UTC
- Number of recursive dependencies: 138
Run revdepcheck::revdep_details(, "rKOMICS") for more info
In both
- checking installed package size ... NOTE
installed size is 24.8Mb sub-directories of 1Mb or more: extdata 24.0Mb
RprobitB
- Version: 1.1.2
- GitHub: https://github.com/loelschlaeger/RprobitB
- Source code: https://github.com/cran/RprobitB
- Date/Publication: 2022-11-06 17:40:10 UTC
- Number of recursive dependencies: 120
Run revdepcheck::revdep_details(, "RprobitB") for more info
In both
- checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
rSPDE
- Version: 2.3.3
- GitHub: https://github.com/davidbolin/rSPDE
- Source code: https://github.com/cran/rSPDE
- Date/Publication: 2023-11-05 22:30:02 UTC
- Number of recursive dependencies: 110
Run revdepcheck::revdep_details(, "rSPDE") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
scater
- Version: 1.30.1
- GitHub: NA
- Source code: https://github.com/cran/scater
- Date/Publication: 2023-11-16
- Number of recursive dependencies: 198
Run revdepcheck::revdep_details(, "scater") for more info
In both
-
checking examples ... ERROR ``` Running examples in ‘scater-Ex.R’ failed The error most likely occurred in:
Name: projectReducedDim
Title: Project cells into an arbitrary dimensionality reduction space.
Aliases: projectReducedDim projectReducedDim,matrix-method
projectReducedDim,SummarizedExperiment-method
** Examples
example_sce <- mockSCE() example_sce <- logNormCounts(example_sce) example_sce <- runUMAP(example_sce) Error in irlba::irlba(L, nv = n, nu = 0, maxit = iters) : function 'as_cholmod_sparse' not provided by package 'Matrix' Calls: runUMAP ... irlba_tsvd_normalized_laplacian_init -> irlba_spectral_tsvd Execution halted ```
-
checking tests ...
`` Running ‘testthat.R’ ERROR Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: 4. └─scater (local) .local(x, ...) 5. └─scater:::.calculate_umap(...) 6. ├─base::do.call(uwot::umap, args) 7. └─uwot (local)`(...) 8. └─uwot:::uwot(...) 9. └─uwot:::spectral_init(V, ndim = n_components, verbose = verbose)- └─uwot:::irlba_tsvd_normalized_laplacian_init(A, ndim, verbose = FALSE)
- └─uwot:::irlba_spectral_tsvd(L, ndim + 1)
- ├─base::suppressWarnings(...)
- │ └─base::withCallingHandlers(...)
- └─irlba::irlba(L, nv = n, nu = 0, maxit = iters)
[ FAIL 14 | WARN 30 | SKIP 0 | PASS 768 ] Error: Test failures Execution halted ```
-
checking installed package size ... NOTE
installed size is 6.1Mb sub-directories of 1Mb or more: doc 5.5Mb
scUtils
- Version: 0.1.0
- GitHub: NA
- Source code: https://github.com/cran/scUtils
- Date/Publication: 2020-06-25 16:20:02 UTC
- Number of recursive dependencies: 52
Run revdepcheck::revdep_details(, "scUtils") for more info
In both
- checking LazyData ... NOTE
'LazyData' is specified without a 'data' directory
SIBER
- Version: 2.1.9
- GitHub: NA
- Source code: https://github.com/cran/SIBER
- Date/Publication: 2023-10-19 09:30:02 UTC
- Number of recursive dependencies: 81
Run revdepcheck::revdep_details(, "SIBER") for more info
In both
-
checking examples ... ERROR ``` Running examples in ‘SIBER-Ex.R’ failed The error most likely occurred in:
Name: fitEllipse
Title: Fit a multivariate normal distribution to x and y data using
jags
Aliases: fitEllipse
** Examples
... priors$k <- 2 priors$tau.mu <- 1.0E-3 fitEllipse(x, y, parms, priors) Error: .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared object '/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/SIBER/rjags/libs/rjags.so': dlopen(/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/SIBER/rjags/libs/rjags.so, 0x000A): Library not loaded: /usr/local/lib/libjags.4.dylib Referenced from: <621A7307-C96A-3A25-BE2B-B9C2339518AE> /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/SIBER/rjags/libs/rjags.so Reason: tried: '/usr/local/lib/libjags.4.dylib' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/usr/local/lib/libjags.4.dylib' (no such file), '/usr/local/lib/libjags.4.dylib' (no such file), '/Library/Frameworks/R.framework/Versions/4.3-arm64/Resourc Execution halted ```
simmr
- Version: 0.5.1.216
- GitHub: https://github.com/andrewcparnell/simmr
- Source code: https://github.com/cran/simmr
- Date/Publication: 2023-10-27 14:20:02 UTC
- Number of recursive dependencies: 129
Run revdepcheck::revdep_details(, "simmr") for more info
In both
- checking whether package ‘simmr’ can be installed ... ERROR
Installation failed. See ‘/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/new/simmr.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘simmr’ ...
** package ‘simmr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using SDK: ‘MacOSX14.2.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/include" -DNDEBUG -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/Rcpp/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppArmadillo/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppDist/include' -I/opt/homebrew/include -fPIC -I/opt/homebrew/include -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/include" -DNDEBUG -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/Rcpp/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppArmadillo/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppDist/include' -I/opt/homebrew/include -fPIC -I/opt/homebrew/include -c run_VB.cpp -o run_VB.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -L/opt/homebrew/lib -o simmr.so RcppExports.o run_VB.o -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -lRblas -L/opt/homebrew/opt/gfortran/lib -F/Library/Frameworks/R.framework/Versions/4.3-arm64 -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/new/simmr.Rcheck/00LOCK-simmr/00new/simmr/libs
...
Error: package or namespace load failed for ‘rjags’:
.onLoad failed in loadNamespace() for 'rjags', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so':
dlopen(/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so, 0x000A): Library not loaded: /usr/local/lib/libjags.4.dylib
Referenced from: <621A7307-C96A-3A25-BE2B-B9C2339518AE> /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so
Reason: tried: '/usr/local/lib/libjags.4.dylib' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/usr/local/lib/libjags.4.dylib' (no such file), '/usr/local/lib/libjags.4.dylib' (no such file), '/Librar
Execution halted
ERROR: lazy loading failed for package ‘simmr’
* removing ‘/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/new/simmr.Rcheck/simmr’
CRAN
* installing *source* package ‘simmr’ ...
** package ‘simmr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using SDK: ‘MacOSX14.2.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/include" -DNDEBUG -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/Rcpp/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppArmadillo/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppDist/include' -I/opt/homebrew/include -fPIC -I/opt/homebrew/include -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/include" -DNDEBUG -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/Rcpp/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppArmadillo/include' -I'/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/RcppDist/include' -I/opt/homebrew/include -fPIC -I/opt/homebrew/include -c run_VB.cpp -o run_VB.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -L/opt/homebrew/lib -o simmr.so RcppExports.o run_VB.o -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib -lRblas -L/opt/homebrew/opt/gfortran/lib -F/Library/Frameworks/R.framework/Versions/4.3-arm64 -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/old/simmr.Rcheck/00LOCK-simmr/00new/simmr/libs
...
Error: package or namespace load failed for ‘rjags’:
.onLoad failed in loadNamespace() for 'rjags', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so':
dlopen(/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so, 0x000A): Library not loaded: /usr/local/lib/libjags.4.dylib
Referenced from: <621A7307-C96A-3A25-BE2B-B9C2339518AE> /Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/library.noindex/simmr/rjags/libs/rjags.so
Reason: tried: '/usr/local/lib/libjags.4.dylib' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/usr/local/lib/libjags.4.dylib' (no such file), '/usr/local/lib/libjags.4.dylib' (no such file), '/Librar
Execution halted
ERROR: lazy loading failed for package ‘simmr’
* removing ‘/Users/simon/Library/CloudStorage/GoogleDrive-garnier@njit.edu/My Drive/Work/research/software/R/viridis/revdep/checks.noindex/simmr/old/simmr.Rcheck/simmr’
simplevis
- Version: 7.1.0
- GitHub: https://github.com/StatisticsNZ/simplevis
- Source code: https://github.com/cran/simplevis
- Date/Publication: 2023-05-09 04:00:02 UTC
- Number of recursive dependencies: 130
Run revdepcheck::revdep_details(, "simplevis") for more info
In both
-
checking package dependencies ... ERROR ``` Packages suggested but not available: 'rgdal', 'rgeos'
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
SimSurvey
- Version: 0.1.6
- GitHub: https://github.com/PaulRegular/SimSurvey
- Source code: https://github.com/cran/SimSurvey
- Date/Publication: 2023-09-19 10:50:10 UTC
- Number of recursive dependencies: 126
Run revdepcheck::revdep_details(, "SimSurvey") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
skpr
- Version: 1.6.1
- GitHub: https://github.com/tylermorganwall/skpr
- Source code: https://github.com/cran/skpr
- Date/Publication: 2023-12-07 16:50:02 UTC
- Number of recursive dependencies: 149
Run revdepcheck::revdep_details(, "skpr") for more info
In both
- checking installed package size ... NOTE
installed size is 6.4Mb sub-directories of 1Mb or more: libs 5.8Mb
SPARSEMODr
- Version: 1.2.0
- GitHub: https://github.com/NAU-CCL/SPARSEMODr
- Source code: https://github.com/cran/SPARSEMODr
- Date/Publication: 2022-07-19 20:50:02 UTC
- Number of recursive dependencies: 127
Run revdepcheck::revdep_details(, "SPARSEMODr") for more info
In both
- checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from: ‘future’ ‘geosphere’ ‘lubridate’ ‘tidyverse’ ‘viridis’ All declared Imports should be used.
spatialrisk
- Version: 0.7.0
- GitHub: https://github.com/mharinga/spatialrisk
- Source code: https://github.com/cran/spatialrisk
- Date/Publication: 2021-11-10 15:30:02 UTC
- Number of recursive dependencies: 134
Run revdepcheck::revdep_details(, "spatialrisk") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 283 marked UTF-8 strings
spectralAnalysis
- Version: 4.3.1
- GitHub: NA
- Source code: https://github.com/cran/spectralAnalysis
- Date/Publication: 2023-01-11 10:00:02 UTC
- Number of recursive dependencies: 119
Run revdepcheck::revdep_details(, "spectralAnalysis") for more info
In both
- checking installed package size ... NOTE
installed size is 6.2Mb sub-directories of 1Mb or more: doc 4.8Mb
SPUTNIK
- Version: 1.4.1
- GitHub: https://github.com/paoloinglese/SPUTNIK
- Source code: https://github.com/cran/SPUTNIK
- Date/Publication: 2022-11-24 10:00:06 UTC
- Number of recursive dependencies: 88
Run revdepcheck::revdep_details(, "SPUTNIK") for more info
In both
-
checking tests ... ``` Running ‘test_constructors.R’ Running ‘test_csr_filter.R’ ERROR Running the tests in ‘tests/test_csr_filter.R’ failed. Last 13 lines of output:
── Failure: CSR filter ───────────────────────────────────────────────────────── length(csrFiltCE$sel.peaks) not equal to 83. 1/1 mismatches [1] 89 - 83 == 6 ...
Error: ! Test failed Backtrace: ▆ 1. ├─testthat::test_that(...) 2. │ └─withr (local)
<fn>() 3. └─reporter$stop_if_needed() 4. └─rlang::abort("Test failed", call = NULL) Execution halted ```
stacomiR
- Version: 0.6.0.7
- GitHub: https://github.com/MarionLegrandLogrami/stacomiR
- Source code: https://github.com/cran/stacomiR
- Date/Publication: 2022-07-18 09:20:02 UTC
- Number of recursive dependencies: 102
Run revdepcheck::revdep_details(, "stacomiR") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 40748 marked UTF-8 strings
stars
- Version: 0.6-4
- GitHub: https://github.com/r-spatial/stars
- Source code: https://github.com/cran/stars
- Date/Publication: 2023-09-11 11:50:02 UTC
- Number of recursive dependencies: 164
Run revdepcheck::revdep_details(, "stars") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘starsdata’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
StratifiedSampling
- Version: 0.4.1
- GitHub: https://github.com/RJauslin/StratifiedSampling
- Source code: https://github.com/cran/StratifiedSampling
- Date/Publication: 2022-10-26 10:55:08 UTC
- Number of recursive dependencies: 128
Run revdepcheck::revdep_details(, "StratifiedSampling") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘rgeos’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
SUMMER
- Version: 1.3.0
- GitHub: https://github.com/richardli/SUMMER
- Source code: https://github.com/cran/SUMMER
- Date/Publication: 2022-07-08 08:50:06 UTC
- Number of recursive dependencies: 140
Run revdepcheck::revdep_details(, "SUMMER") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘INLA’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
surveyvoi
- Version: 1.0.5
- GitHub: https://github.com/prioritizr/surveyvoi
- Source code: https://github.com/cran/surveyvoi
- Date/Publication: 2022-09-17 19:56:11 UTC
- Number of recursive dependencies: 118
Run revdepcheck::revdep_details(, "surveyvoi") for more info
In both
-
checking package dependencies ... ERROR ``` Package suggested but not available: ‘gurobi’
The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable R_CHECK_FORCE_SUGGESTS to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. ```
tectonicr
- Version: 0.2.95
- GitHub: https://github.com/tobiste/tectonicr
- Source code: https://github.com/cran/tectonicr
- Date/Publication: 2023-11-02 04:10:02 UTC
- Number of recursive dependencies: 110
Run revdepcheck::revdep_details(, "tectonicr") for more info
In both
- checking data for non-ASCII characters ... NOTE
Note: found 56 marked UTF-8 strings
troopdata
- Version: 0.1.5
- GitHub: https://github.com/meflynn/troopdata
- Source code: https://github.com/cran/troopdata
- Date/Publication: 2022-01-31 22:00:02 UTC
- Number of recursive dependencies: 93
Run revdepcheck::revdep_details(, "troopdata") for more info
In both
-
checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘tibble’ All declared Imports should be used. -
checking data for non-ASCII characters ... NOTE
Note: found 1 marked UTF-8 string
TSstudio
- Version: 0.1.7
- GitHub: https://github.com/RamiKrispin/TSstudio
- Source code: https://github.com/cran/TSstudio
- Date/Publication: 2023-08-09 04:40:07 UTC
- Number of recursive dependencies: 152
Run revdepcheck::revdep_details(, "TSstudio") for more info
In both
- checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: ‘forecastHybrid’ All declared Imports should be used.
xQTLbiolinks
- Version: 1.2.2
- GitHub: https://github.com/dingruofan/xQTLbiolinks
- Source code: https://github.com/cran/xQTLbiolinks
- Date/Publication: 2022-08-27 13:50:02 UTC
- Number of recursive dependencies: 137
Run revdepcheck::revdep_details(, "xQTLbiolinks") for more info
In both
-
checking examples ... ERROR ``` Running examples in ‘xQTLbiolinks-Ex.R’ failed The error most likely occurred in:
Name: xQTLanalyze_TSExp
Title: Perform tissue-specific expression analysis for genes.
Aliases: xQTLanalyze_TSExp
** Examples
TSgene <- xQTLanalyze_TSExp(extractGeneInfo(gencodeGeneInfoAllGranges)$gencodeId[1:5]) == Check the gene name: Error: lexical error: invalid char in json text. <!DOCTYPE html> <html lang="en" (right here) ------^ Execution halted ```
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