NEWS.md

In sjpierce/piercer: Functions for Research and Statistical Computing

News Regarding Changes to piercer

0.18.0, 2024-12-29

• DESCRIPTION
  • Updated RoxygenNote field.
• piercer.Rproj
  • Added a ProjectId.
• README.Rmd andf README.md
  • Update badges, task list, and explanatory text.
• R/Utility_Functions.R
  • Added assertions to move_file() function to check arguments.

0.17.0, 2023-12-07

• Updated R/Utility_Functions.R to fix bug in which_latex() caused by changes in tinytex::tlmgr_version().

0.16.0, 2023-06-16

• Added R/SimTools.R with sim_2arm_prepost() function.
• Updated DESCRIPTION and NAMESPACE to import additional packages.
• Updated help files.
  • Updated man/lrcm.rd.
  • Added man/sim_2arm_prepost.Rd.

0.15.0, 2023-03-02

• Updated R/Utility_Functions.R to add move_file() function.
• Updated NAMESPACE
• Added help documentation for move_file() to man/move_file.Rd.

0.14.0, 2023-02-14

• Updated R/Utility_Functions.R to add all_classes() function.
• Updated NAMESPACE
• Added help documentation for all_classes() to man/all_classes.Rd.
• Added tibble package to DESCRIPTION Suggests field.

0.13.0, 2023-01-21

• Updated R/Utility_Functions.R to improve which_latex() function.
• Fixed help documentation for lrcm() by documenting the roc parameter.
• Updated RoxygenNote field in DESCRIPTION, NAMESPACE, and help files via devtools::document().

0.12.0, 2022-05-14

• Updated NAMESPACE by running devtools::check()
• Updated R/Correlation_Functions.R
  • Fixed assertions used to check arguments for ci.rpc() and ci.rp().
• Updated tests/testthat/test-ci.rpc.R to fix an expected value and replace comments about test statuses.
• No errors or warnings from devtools::check() under R 4.2.0.

0.11.0, 2022-03-13

• Updated R/GLM_Functions.R to add extract_glm() function.
• Added man/extract_glm.Rd help file.
• Updated NAMESPACE file.
• Updated DESCRIPTION to add new dependencies on broom and texreg.

0.10.1, 2021-12-12

• Added tests/testthat/test-ci.rpc.R to automate unit tests of ci.rpc().
  • 9 tests of ci.rpc() still fail.
  • 4 tests pass.

0.10.0, 2021-12-12

• Updated R/GEE_Functions.R to hold source code for:
  • vif_gee_crt() function and associated help.
• Updated NAMESPACE add vif_gee_crt() function.
• Added man/vif_gee_crt.Rd to hold help files for vif_gee_crt() function.
• Updated man/piercer-package.Rd description field (changed line breaks).

0.9.1, 2021-09-26

• Updated DESCRIPTION to:
  • Revise the description field.
  • Update the RoxygenNote field.
• Updated man/piercer-package.Rd to reflect changes to DESCRIPTION.
• Updated README.Rmd and README.Rmd to:
  • Update introductory text.
  • Update installation instructions.
  • Fix a spelling error.
  • Update the References section.
  • Update the Task List.

0.9.0, 2021-06-23

• Added R/Utility_Functions.R to hold source code for:
  • which_latex() function and associated help documentation.
  • git_report() function and associated help documentation.
• Updated NAMESPACE file to reflect new functions
• Added new help files:
  • man/git_report.Rd
  • man/which_latex.Rd
• Updated DESCRIPTION to:
  • List additional suggested and imported packages.
  • Put list of imported packages in alphabetical order.
  • Add the VignetteBuilder field.

0.8.4, 2021-06-23

• Fixed tag_um() because devtools::check() revealed an issue in running the example.

0.8.3, 2021-04-07

• Minor update to lrcm() help caused by running check().

0.8.2, 2020-10-01

• Updated R/GEE_Functions.R to:
  • Fix geep() object reference to the p1 argument.

0.8.1, 2020-09-28

• Updated R/GEE_Functions.R to:
  • Add assertions to check geen() inputs.
  • Add assertions to check geep() inputs.
  • Remove empty examples sections from geen() & geep() help.
• Updated README.Rmd and README.md to to update task list.

0.8.0, 2020-09-28

• Updated R/GEE_Functions.R to:
  • Add new geen() function and corresponding help documentation.
  • Fix geen() default arguments.
  • Fix geen() help documentation.
• Updates NAMESPACE.

0.7.0, 2020-09-26

• Updated R/GEE_Functions.R to:
  • Add new geen() function and corresponding help documentation.
  • Fix find_tor_probs() fucntion name in help documentation.

0.6.0, 2020-09-22

• Added R/GEE_Functions.R to hold new find_tor_probs() function and additional functions yet to be developed.
• Added tests/testthat/test-find_tor_probs.R to automate unit testing for find_tor_probs().

0.5.1, 2020-09-19

• Updated R/Data_Management_Functions.R to fix check() error about tag_um() example code "Error: Can't convert to >." That reauired extensive changes in the function.
• Updated tag_um() help documentation.

0.5.0, 2020-09-17

• Updated R/Transform_Function.R to add:
  • p2odds() function and associated help.
  • p2or() function and associated help. .

0.4.0, 2020-05-05

• Updated README.Rmd and README.md installation instructions.
• Successfully passed devtools::check() and installed via devtools::install_github("sjpierce/piercer") under R 4.0.0 on Windows 10.

0.3.8, 2020-04-30

• Upgraded software environment to to R 4.0.0, Rtools 4.0, and RStudio 1.2.5042.

0.3.7, 2020-04-28

• Fixed bug in r.p() setting dimnames on sample size matrix N.

0.3.6, 2020-04-28

• Revised rownames in r.p() output for consistency with r.pc() and r.ps().
• Fixed bug in r.p() setting dimnames on sample size matrix N.

0.3.5, 2020-04-27

• Fixed r.ps() error message about subscript out of bounds.
• r.ps() can now extract a subset of the polyserial correlations from the hetcor object by specifying cont and/or ord arguments shorter than those used to create the hetcor object.
• Updated help for r.pc().

0.3.4, 2020-04-24

• Improved extraction sample size from a hetcor object in r.p().

0.3.3, 2020-04-24

• Fixed extraction of sample size in r.p().

0.3.2, 2020-04-21

• Updated ci.rp() help to say it can be applied to Spearman's rho.
• Updated ci.rp() output to include degrees of freedom.
• Updated r.p() to match new ci.rp() output.
• Updated README.Rmd and README.md with better installtion instructions.

0.3.1, 2020-04-14

• Updated ci.rp() to use t-distribution instead of z-distribution for getting p-value.

0.3.0, 2020-03-22

• Added Fisher_r2z(), Fisher_z2r(), ci.rp(), r.p() functions and corresponding help files.
• Updated ci.rpc() function to use Fisher_r2z() and Fisher_z2r(), and to include a conf.level argument.
• Updated r.pc() and r.ps() to show correlation type in row names.
• Updated r.pc() help file.

0.2.2, 2020-03-17

• Fix warnings generated by PlotCookD() and PlotHat().

0.2.1, 2020-02-07

• Fixed a bug in lrcm() that was possibly caused by changes in structure of objects created by pROC::ci.coords().
• Updated task list in README.Rmd and README.md.
• For rxx.NL() in R/NL-SEM_Reliability.R:
  • Solved check() warning about 'library' or 'require' call to 'pbivnorm' in package code.
  • Solved check() note: rxx.NL: no visible global function definition for 'pbivnorm'.
  • Added rxx.NL() help documentation.
  • Improved code indentation and formatting.

0.2.0, 2020-02-06

• Added R/NL-SEM_Reliability.R script.
• Upated task list in README.Rmd and README.md.

0.1.3, 2019-12-10

• Added package-level documentation ?piercer.

0.1.2, 2019-12-01

• Fixed a typographical error in p2bfb() help documentation.

0.1.1, 2019-11-27

• Updated help documentation for p2bfb() and lrcm() functions.

0.1.0, 2019-11-03

• Updated README.Rmd and README.md installation instructions, added links to the references, and a link to the package's GitHub repository.
• This package is now a pre-requisite for other packages I am developing.
• Tested normal install instructions on a laptop. They worked. Recent experience suggests that installing on a Windows server network share will require more steps, but I haven't got a fully tested procedure yet.

0.0.0.9015, 2019-10-13

• Added examples to ci.rpc(), r.pc(), and r.pc() help documentation to resolve GitHub issue #7.

0.0.0.9014, 2019-09-21

• Added CRAN badge to README.Rmd & README.md.

0.0.0.9013, 2019-09-21

• Started using roxygen2 import and importFrom tags to replace package::function format for calling functions in other packages inside my custom functions.

0.0.0.9012, 2019-09-19

• Added lrcm().
• Added brier().

0.0.0.9011, 2019-09-15

• Fixed bug in PlotCookD() and PlotHat() tht affected row names used in plots.
• Improved some help documentation.
• Added ci.rpc(), r.pc(), and r.ps().

0.0.0.9010, 2019-09-15

• Added InfCases(), PlotCookD(), and PlotHat().

0.0.0.9009, 2019-09-14

• Added invlogit() and automated tests.
• Added hatco() and CookDco().

0.0.0.9008, 2019-09-14

• Now p2s(), p2bfb(), p2pp, and convertp() return NA when p = NA.
• Update error messages for p2s(), p2bfb(), p2pp, and convertp().
• Updated automated tests for p2s(), p2bfb(), p2pp, and convertp().
• Added invlogit() and automated tests.
• Added hatco() and CookDco().

0.0.0.9007, 2019-09-12

• Functions p2s(), p2bfb(), p2pp, and convertp() now check for invalid values of digits and produce error messages when those checks fail. Added automated tests for verifying that these checks work.

0.0.0.9006, 2019-09-08

• Package now imports stats, haven, and assertthat packages.
• Started using testthat and assertthat packages to automate testing my functions.
• Functions p2s(), p2bfb(), p2pp, and convertp() now check for invalid values of p and produce error messages when those checks fail. Added automated tests for verifying that these checks work.

0.0.0.9005, 2019-09-07

• Updated an example for tag_um() to fix GitHub issue #1.
• DESCRIPTION file now suggests haven package.

0.0.0.9004, 2019-09-07

• Updated pseudoR2() to fix GitHub issue #2.

0.0.0.9003, 2019-09-05

• Replaced README.md (which is now created by knitting README.Rmd)

0.0.0.9002, 2019-09-04

• Added a NEWS.md file to track changes to the package.
• Fixed an example in p2pp() documentation.

0.0.0.9001, 2019-09-04

• Updated title in DESCRIPTION file to work better with citation().

0.0.0.9000, 2019-09-02

• Created initial package and R functions.
• Created repository https://github.com/sjpierce/piercer.git

sjpierce/piercer documentation built on Dec. 30, 2024, 3:28 p.m.