snapclust.choose.k: Choose the number of clusters for snapclust using BIC

In skayondo/adegenet: Exploratory Analysis of Genetic and Genomic Data

Description

Do not use. We work on that stuff. Contact us if interested.

Usage

snapclust.choose.k(max, ..., IC = AIC, IC.only = TRUE)

Arguments

max	An integer indicating the maximum number of clusters to seek; snapclust will be run for all k from 2 to max.
...	Arguments passed to snapclust.
IC	A function computing the information criterion for snapclust objects. Available statistics are AIC (default), AICc, and BIC.
IC.only	A logical (TRUE by default) indicating if IC values only should be returned; if FALSE, full snapclust objects are returned.

Author(s)

Thibaut Jombart [e-mail]

See Also

snapclust to generate individual clustering solutions, and BIC.snapclust for computing BIC for snapclust objects.

skayondo/adegenet documentation built on July 18, 2020, 12:38 a.m.