truenames: Restore true labels of an object

In skayondo/adegenet: Exploratory Analysis of Genetic and Genomic Data

Description

The function truenames returns some elements of an object (genind or genpop) using true names (as opposed to generic labels) for individuals, markers, alleles, and population.

Important: as of adegenet_2.0-0, these functions are deprecated as true labels are used whenever possible. Please use the function tab instead.

Usage

## S4 method for signature 'genind'
truenames(x)
## S4 method for signature 'genpop'
truenames(x)

Arguments

x	a genind or a genpop object

Value

If x\$pop is empty (NULL), a matrix similar to the x\$tab slot but with true labels.

If x\$pop exists, a list with this matrix (\$tab) and a population vector with true names (\$pop).

Author(s)

Thibaut Jombart [e-mail]

See Also

tab

skayondo/adegenet documentation built on July 18, 2020, 12:38 a.m.