fortify_aggregate.pomp: Takes in data from the R pomp package where the output is a...
In skgallagher/EpiCompare: A Pipeline to Analyze and Compare Infectious Disease Epidemics
Description
Usage
Arguments
Details
Value
View source: R/fortify-aggregate-pomp-pompList.R
Description
Takes in data from the R pomp package where the output is a data frame and
puts it in SIR format for EpiCompare
Usage
1
2
## S3 method for class 'pomp'
fortify_aggregate(data, states = NULL, package_source = NULL)
Arguments
data
Output from a pomp simulation where the output is a data frame,
pomp::simulate()
states
vector of state names
package_source
optional package name
Details
The default variables that are retained are SIR, but can be modified
with the states argument. If codestates = NULL, we will attempt
to find all single letter names in POMP and output those.
Value
data frame with the following columns
- t
the time
- sim
simulation number (factor variable) (optional column)
- Xk
where k = 0, ..., K
skgallagher/EpiCompare documentation built on Sept. 14, 2021, 5:45 a.m.
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Description Usage Arguments Details Value
View source: R/fortify-aggregate-pomp-pompList.R
Description
Takes in data from the R pomp package where the output is a data frame and puts it in SIR format for EpiCompare
Usage
1 2 | ## S3 method for class 'pomp'
fortify_aggregate(data, states = NULL, package_source = NULL)
|
Arguments
data |
Output from a pomp simulation where the output is a data frame,
|
states |
vector of state names |
package_source |
optional package name |
Details
The default variables that are retained are SIR, but can be modified
with the states argument. If codestates = NULL, we will attempt
to find all single letter names in POMP and output those.
Value
data frame with the following columns
- t
the time
- sim
simulation number (factor variable) (optional column)
- Xk
where k = 0, ..., K
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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