cran-comments.md
In skiptoniam/dlmpr: Spatially- and Temporally-Explicit Population Simulator
2019.03.28 - Initial submission
We have revised the vignette to substantially reduce check time.
Regarding the note, we have intentionally left the connector word (and) in lowercase to accurately reflect the acronym of our package name. The title meets the requirement of title case.
Test environments
- local OS X install, R 3.5.3
- ubuntu 14.04 (on travis-ci), R 3.5.3
- win-builder (devel and release)
R CMD check results
0 errors | 0 warnings | 1 note
- This is a new release.
2019.04.02 - Updated version 0.2.1
Cleaned up unused dependencies and imports.
Fixed expected variable inputs to sqrt() and round() with explicit casts in C++ code to remove Solaris build warning.
2020.01.17 - Updated version 1.0.0
Based on internal testing and journal reviewer comments, we have added several updates in a new major release of the package.
Test environments
- Oracle Solaris 10, x86, 32 bit, R-patched (experimental)
- local Mac OS X install, R 3.6.2
- Windows Server 2008 R2 SP1, R-devel, 32/64 bit
- Ubuntu Linux 16.04 LTS, R-release, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
- Ubuntu 14.04 (on travis-ci), R 3.5.3, 3.6.2
- win-builder (devel and release)
R CMD check results
0 errors | 0 warnings | 0 note
2020.03.22 - Updated version 1.1.0
Bug fixes:
- transpositional error in cellular automata dispersal function
- incorrect modification of transition matrices based on approach to carrying capacity
in competition density function
Performance improvements:
- carrying capacity raster is generated once per timestep if function is used.
Test environments
- Oracle Solaris 10, x86, 32 bit, R-patched (experimental)
- local Mac OS X install, R 3.6.2
- Windows Server 2008 R2 SP1, R-devel, 32/64 bit
- Ubuntu Linux 16.04 LTS, R-release, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
R CMD check results
0 errors | 0 warnings | 0 note
2021.02.25 - Updated version 1.2.0
Updates:
- Revised transition matrix stochasticity documentation for clarity
- Fixed error in growth transition functions documentation
- Added functionality and documentation for two-sex transition matrices
Bug fixes:
- Fixed density_dependence_stages length mismatch in dispersal function
Performance improvements:
- revised testing code to speed up test runtimes
Test environments
- Oracle Solaris 10, x86, 32 bit, R-release, Oracle Developer Studio 12.6
- macOS 10.13.6 High Sierra, R-release, brew
- Windows Server 2008 R2 SP1, R-devel, 32/64 bit
- Ubuntu Linux 20.04.1, R-release, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
R CMD check results
0 errors | 0 warnings | 2 notes
checking sizes of PDF files under 'inst/doc' ... NOTE
Unable to find GhostScript executable to run checks on size reduction
checking top-level files ... NOTE
Files 'README.md' or 'NEWS.md' cannot be checked without 'pandoc' being installed.
2021.03.03 - Minor updated version 1.2.1
Updates:
- Revised deprecated C++ function
- Reduced installation size in vignettes
R CMD check results
0 errors | 0 warnings | 0 notes
2022.10.05 - Updated version 1.3.0
Updates:
- Re-wrote plotting and visualisation functions and updated vignettes accordingly
- Added support for two-sex simulations
- Added minimum distance parameter to cellular automata dispersal function
Bug fixes:
- Fixed neighbouring cell indexing error in kernel-based dispersal function
Misc:
- Removed reference to deprecated function in future package
- Removed empty NEWS file
Test environments
- macOS 11.5.2 Big Sur, R-release, brew
- Windows Server 2022, R-devel, 64 bit
- Ubuntu Linux 20.04.1 LTS, R-release, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
R CMD check results
0 errors | 1 warning | 1 note
WARNING
'qpdf' is needed for checks on size reduction of PDFs
NOTE
Found the following files/directories:
'lastMiKTeXException'
2023.12.5 - Updated version 1.3.1
Misc:
- manually added '@aliases steps-package' to steps.R due to roxygen2 issue:
https://github.com/r-lib/roxygen2/issues/1491
Test environments
- macOS 13.3.1 Ventura, R-release, brew
- Windows Server 2022, R-devel, 64 bit
- Ubuntu Linux 20.04.1 LTS, R-release, GCC
- Ubuntu Linux 20.04.1 LTS, R-devel, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
- win-builder (devel and release)
R CMD check results
0 errors | 1 warnings | 2 notes
WARNING
'qpdf' is needed for checks on size reduction of PDFs
NOTE
Found the following files/directories:
''NULL''
NOTE
Found the following files/directories:
'lastMiKTeXException'
skiptoniam/dlmpr documentation built on Jan. 27, 2024, 10:40 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
2019.03.28 - Initial submission
We have revised the vignette to substantially reduce check time.
Regarding the note, we have intentionally left the connector word (and) in lowercase to accurately reflect the acronym of our package name. The title meets the requirement of title case.
Test environments
- local OS X install, R 3.5.3
- ubuntu 14.04 (on travis-ci), R 3.5.3
- win-builder (devel and release)
R CMD check results
0 errors | 0 warnings | 1 note
- This is a new release.
2019.04.02 - Updated version 0.2.1
Cleaned up unused dependencies and imports. Fixed expected variable inputs to sqrt() and round() with explicit casts in C++ code to remove Solaris build warning.
2020.01.17 - Updated version 1.0.0
Based on internal testing and journal reviewer comments, we have added several updates in a new major release of the package.
Test environments
- Oracle Solaris 10, x86, 32 bit, R-patched (experimental)
- local Mac OS X install, R 3.6.2
- Windows Server 2008 R2 SP1, R-devel, 32/64 bit
- Ubuntu Linux 16.04 LTS, R-release, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
- Ubuntu 14.04 (on travis-ci), R 3.5.3, 3.6.2
- win-builder (devel and release)
R CMD check results
0 errors | 0 warnings | 0 note
2020.03.22 - Updated version 1.1.0
Bug fixes: - transpositional error in cellular automata dispersal function - incorrect modification of transition matrices based on approach to carrying capacity in competition density function Performance improvements: - carrying capacity raster is generated once per timestep if function is used.
Test environments
- Oracle Solaris 10, x86, 32 bit, R-patched (experimental)
- local Mac OS X install, R 3.6.2
- Windows Server 2008 R2 SP1, R-devel, 32/64 bit
- Ubuntu Linux 16.04 LTS, R-release, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
R CMD check results
0 errors | 0 warnings | 0 note
2021.02.25 - Updated version 1.2.0
Updates: - Revised transition matrix stochasticity documentation for clarity - Fixed error in growth transition functions documentation - Added functionality and documentation for two-sex transition matrices Bug fixes: - Fixed density_dependence_stages length mismatch in dispersal function Performance improvements: - revised testing code to speed up test runtimes
Test environments
- Oracle Solaris 10, x86, 32 bit, R-release, Oracle Developer Studio 12.6
- macOS 10.13.6 High Sierra, R-release, brew
- Windows Server 2008 R2 SP1, R-devel, 32/64 bit
- Ubuntu Linux 20.04.1, R-release, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
R CMD check results
0 errors | 0 warnings | 2 notes checking sizes of PDF files under 'inst/doc' ... NOTE Unable to find GhostScript executable to run checks on size reduction checking top-level files ... NOTE Files 'README.md' or 'NEWS.md' cannot be checked without 'pandoc' being installed.
2021.03.03 - Minor updated version 1.2.1
Updates: - Revised deprecated C++ function - Reduced installation size in vignettes
R CMD check results
0 errors | 0 warnings | 0 notes
2022.10.05 - Updated version 1.3.0
Updates: - Re-wrote plotting and visualisation functions and updated vignettes accordingly - Added support for two-sex simulations - Added minimum distance parameter to cellular automata dispersal function Bug fixes: - Fixed neighbouring cell indexing error in kernel-based dispersal function Misc: - Removed reference to deprecated function in future package - Removed empty NEWS file
Test environments
- macOS 11.5.2 Big Sur, R-release, brew
- Windows Server 2022, R-devel, 64 bit
- Ubuntu Linux 20.04.1 LTS, R-release, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
R CMD check results
0 errors | 1 warning | 1 note WARNING 'qpdf' is needed for checks on size reduction of PDFs NOTE Found the following files/directories: 'lastMiKTeXException'
2023.12.5 - Updated version 1.3.1
Misc: - manually added '@aliases steps-package' to steps.R due to roxygen2 issue: https://github.com/r-lib/roxygen2/issues/1491
Test environments
- macOS 13.3.1 Ventura, R-release, brew
- Windows Server 2022, R-devel, 64 bit
- Ubuntu Linux 20.04.1 LTS, R-release, GCC
- Ubuntu Linux 20.04.1 LTS, R-devel, GCC
- Debian Linux, R-devel, GCC ASAN/UBSAN
- Fedora Linux, R-devel, clang, gfortran
- win-builder (devel and release)
R CMD check results
0 errors | 1 warnings | 2 notes WARNING 'qpdf' is needed for checks on size reduction of PDFs NOTE Found the following files/directories: ''NULL'' NOTE Found the following files/directories: 'lastMiKTeXException'
R Package Documentation
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