Files in skiptoniam/dlmpr
Spatially- and Temporally-Explicit Population Simulator
.Rbuildignore
.github/workflows/check_standard.yaml
.github/workflows/test-coverage.yaml
.gitignore
CRAN-SUBMISSION
DESCRIPTION
NAMESPACE
R/RcppExports.R
R/data.R
R/dispersal_kernel_functions-class.R
R/dispersal_proportion_functions-class.R
R/growth_transition_functions-class.R
R/habitat_dynamics-functions.R
R/landscape-class.R
R/population_change-functions.R
R/population_density_dependence-functions.R
R/population_dispersal-functions.R
R/population_dynamics-class.R
R/population_modification-functions.R
R/simulation_results-class.R
R/steps.R
R/utils.R
R/visualisation.R
cran-comments.md
data/egk_destinations.rda
data/egk_fire.rda
data/egk_hab.rda
data/egk_k.rda
data/egk_mat.rda
data/egk_mat_stoch.rda
data/egk_origins.rda
data/egk_pop.rda
data/egk_road.rda
data/egk_sf.rda
man/ceiling_density.Rd
man/cellular_automata_dispersal.Rd
man/compare_emp.Rd
man/competition_density.Rd
man/density_dependence_dispersing.Rd
man/dispersal_kernel.Rd
man/dispersal_proportion_function.Rd
man/disturbance.Rd
man/egk.Rd
man/exponential_dispersal_kernel.Rd
man/extract_spatial.Rd
man/fast_dispersal.Rd
man/fire_effects.Rd
man/growth.Rd
man/habitat_dynamics_functions.Rd
man/kernel_dispersal.Rd
man/landscape.Rd
man/modified_transition.Rd
man/mortality.Rd
man/plot.simulation_results.Rd
man/plot_hab_spatial.Rd
man/plot_k_spatial.Rd
man/plot_k_trend.Rd
man/plot_pop_spatial.Rd
man/plot_pop_trend.Rd
man/population_change_functions.Rd
man/population_density_dependence_functions.Rd
man/population_dispersal_functions.Rd
man/population_dynamics.Rd
man/population_modification_functions.Rd
man/set_proportion_dispersing.Rd
man/simulation.Rd
man/steps.Rd
man/transition_function.Rd
man/translocation.Rd
man/visualisation.Rd
readme.Rmd
readme.md
src/Makevars
src/RcppExports.cpp
src/rcpp_dispersal_funs_v4.cpp
src/rcpp_utils_funs.cpp
steps.Rproj
tests/testthat.R
tests/testthat/test_dispersal_kernel_functions.R
tests/testthat/test_dispersal_proportion_functions.R
tests/testthat/test_growth_transition_functions.R
tests/testthat/test_habitat_dynamics_functions.R
tests/testthat/test_landscape_class.R
tests/testthat/test_population_change_functions.R
tests/testthat/test_population_density_dependence_functions.R
tests/testthat/test_population_dispersal_functions.R
tests/testthat/test_population_dynamics_class.R
tests/testthat/test_population_modification_functions.R
tests/testthat/test_simulation_results_class.R
tests/testthat/test_utility_functions.R
tests/testthat/test_visualisation_functions.R
vignettes/custom_function_example.Rmd
vignettes/kangaroo_model_example.Rmd
vignettes/steps_diagram.png
working/archive_code_for_ref/demography-class_old.R
working/archive_code_for_ref/demography_dynamics-class_old.R
working/archive_code_for_ref/dhmpr_architecture_sketch.R
working/archive_code_for_ref/dhmpr_architecture_sketch_v2.R
working/archive_code_for_ref/dispersal-class_old.R
working/archive_code_for_ref/dynamics-class.R
working/archive_code_for_ref/event-class.R
working/archive_code_for_ref/experiment-class.R
working/archive_code_for_ref/extract_tree_grids_boab.R
working/archive_code_for_ref/fire-module-class.R
working/archive_code_for_ref/habitat-class_old.R
working/archive_code_for_ref/habitat_dynamics-class_old.R
working/archive_code_for_ref/koala_example_old.R
working/archive_code_for_ref/lagged_fire_effects.R
working/archive_code_for_ref/module-class.R
working/archive_code_for_ref/running_analysis_as_sparse_matricies.R
working/archive_code_for_ref/simulation-class.R
working/archive_code_for_ref/simulation_results-class.R
working/archive_code_for_ref/test_demography_functions.R
working/archive_code_for_ref/test_experiment.R
working/archive_code_for_ref/test_simulation.R
working/archive_code_for_ref/testing_rcpp_dispersal_functions.R
working/examples/greater_glider_example.R
working/examples/koala_data_CBRI.R
working/examples/koala_example.R
working/examples/koala_model_permutations.R
working/examples/steps_api_redesign.R
