qdecr_prep_mgh: Combine all MGH files into one object

In slamballais/QDECR: Vertex-wise statistical analysis

Description

Combine all MGH files into one object

Usage

qdecr_prep_mgh(
  input_path,
  files_list = list.files(input_path),
  mask,
  hemi,
  measure,
  fwhmc,
  target,
  n_cores,
  dir_tmp,
  project,
  backing,
  verbose
)

Arguments

input_path	path to parent directory
files_list	file names within 'input.list'
mask	mask to be used in later steps (i.e. analysis)
hemi	"lh" or "rh"
measure	vertex measure (e.g. "thickness")
fwhmc	the fwhm value in full notation (i.e. 20, 23, 30, etc)
target	the target template (usually "fsaverage")
n_cores	the number of cores to be used
dir_tmp	directory to store the temporary big matrices; useful for shared memory; defaults to 'dir_out'
project	the base name you want to assign to the output files
backing	the path to the backing file
verbose	if TRUE, writes out standard log; if FALSE, no output is generated

Value

matrix with vertex data (columns) for each file (rows)

slamballais/QDECR documentation built on Jan. 9, 2022, 1:22 p.m.