|cen||A dataset ready to use with CENTIPEDE.|
|centipede_data||Count readstarts at each nucleotide position in each BED...|
|fitAndPlot||Fit a motif with CENTIPEDE and plot the profile and posterior...|
|parse_region||Parse a genomic region into parts.|
|read_bedGraph||Read a bedGraph file with 4 columns: chrom, start, end, score|
|read_fimo||Read a text file output by FIMO and select sites that meet a...|
|site_cons||A vector of mean conservation scores for the PWM sites in...|
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