read_fimo: Read a text file output by FIMO and select sites that meet a...
In slowkow/CENTIPEDE.tutorial: A tutorial for running CENTIPEDE.
Description
Usage
Arguments
Details
Value
Description
Read a text file output by FIMO and select sites that meet a significance
threshold.
Usage
1
Arguments
fimo_file
A FIMO text file with PWM match sites.
pvalue
Select FIMO matches with p-value less than this.
Details
For sites represented multiple times, the one with the maximum
score is selected.
Value
A dataframe with one row per site.
slowkow/CENTIPEDE.tutorial documentation built on May 30, 2019, 3:06 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value
Description
Read a text file output by FIMO and select sites that meet a significance threshold.
Usage
1 |
Arguments
fimo_file |
A FIMO text file with PWM match sites. |
pvalue |
Select FIMO matches with p-value less than this. |
Details
For sites represented multiple times, the one with the maximum score is selected.
Value
A dataframe with one row per site.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.