Files in smorabit/scicat
DESCRIPTION
NAMESPACE
R/cicero_functions.R
R/enrichment.R
R/liger_functions.R
R/sc_cluster_stability.R
README.md
bookdown/01-stability.rmd
bookdown/_book/_main_files/figure-html/barplot-1.png
bookdown/_book/_main_files/figure-html/heatmap-1.png
bookdown/_book/_main_files/figure-html/qc filtering-1.png
bookdown/_book/_main_files/figure-html/qc filtering-2.png
bookdown/_book/_main_files/figure-html/unnamed-chunk-1-1.png
bookdown/_book/_main_files/figure-html/unnamed-chunk-1-2.png
bookdown/_book/_main_files/figure-html/unnamed-chunk-1-3.png
bookdown/_book/_main_files/figure-html/unnamed-chunk-2-1.png
bookdown/_book/_main_files/figure-html/unnamed-chunk-2-2.png
bookdown/_book/_main_files/figure-html/unnamed-chunk-2-3.png
bookdown/_book/_main_files/figure-html/unnamed-chunk-3-1.png
bookdown/_book/_main_files/figure-html/unnamed-chunk-4-1.png
bookdown/_book/_main_files/figure-html/unnamed-chunk-5-1.png
bookdown/_book/cluster-stability-analysis.html
bookdown/_book/index.html
bookdown/_book/libs/gitbook-2.6.7/css/fontawesome/fontawesome-webfont.ttf
bookdown/_book/libs/gitbook-2.6.7/css/plugin-bookdown.css
bookdown/_book/libs/gitbook-2.6.7/css/plugin-fontsettings.css
bookdown/_book/libs/gitbook-2.6.7/css/plugin-highlight.css
bookdown/_book/libs/gitbook-2.6.7/css/plugin-search.css
bookdown/_book/libs/gitbook-2.6.7/css/plugin-table.css
bookdown/_book/libs/gitbook-2.6.7/css/style.css
bookdown/_book/libs/gitbook-2.6.7/js/app.min.js
bookdown/_book/libs/gitbook-2.6.7/js/jquery.highlight.js
bookdown/_book/libs/gitbook-2.6.7/js/lunr.js
bookdown/_book/libs/gitbook-2.6.7/js/plugin-bookdown.js
bookdown/_book/libs/gitbook-2.6.7/js/plugin-fontsettings.js
bookdown/_book/libs/gitbook-2.6.7/js/plugin-search.js
bookdown/_book/libs/gitbook-2.6.7/js/plugin-sharing.js
bookdown/_book/libs/jquery-2.2.3/jquery.min.js
bookdown/_book/search_index.json
bookdown/_bookdown_files/_main_files/figure-html/barplot-1.png
bookdown/_bookdown_files/_main_files/figure-html/heatmap-1.png
bookdown/_bookdown_files/_main_files/figure-html/qc filtering-1.png
bookdown/_bookdown_files/_main_files/figure-html/qc filtering-2.png
bookdown/_bookdown_files/_main_files/figure-html/unnamed-chunk-1-1.png
bookdown/_bookdown_files/_main_files/figure-html/unnamed-chunk-1-2.png
bookdown/_bookdown_files/_main_files/figure-html/unnamed-chunk-1-3.png
bookdown/_bookdown_files/_main_files/figure-html/unnamed-chunk-2-1.png
bookdown/_bookdown_files/_main_files/figure-html/unnamed-chunk-2-2.png
bookdown/_bookdown_files/_main_files/figure-html/unnamed-chunk-2-3.png
bookdown/_bookdown_files/_main_files/figure-html/unnamed-chunk-3-1.png
bookdown/_bookdown_files/_main_files/figure-html/unnamed-chunk-4-1.png
bookdown/_bookdown_files/_main_files/figure-html/unnamed-chunk-5-1.png
bookdown/header.html
bookdown/index.Rmd
for_liz.R
images/.DS_Store
images/cluster_intersection.png
images/stability_heatmap.png
man/OR.Rd
man/ORA.Rd
man/cluster_res_stability_heatmap.Rd
man/cluster_stability_barplot.Rd
man/compute_factor_genes.Rd
man/compute_shared_genes.Rd
man/enrichment_heatmap.Rd
man/enrichment_test.Rd
man/flanking_connections.Rd
man/plot_factor_genes.Rd
man/sc_cluster_res_stability.Rd
man/sc_cluster_stability.Rd
scicat.Rproj
stability.md
vignettes/.ipynb_checkpoints/stability_tutorial-checkpoint.ipynb
vignettes/01-stability.rmd
vignettes/stability.html
vignettes/stability_files/fonts/open-sans-400.woff
vignettes/stability_files/fonts/open-sans-700.woff
vignettes/stability_files/images/body-bg.jpg
vignettes/stability_files/images/body-bg.png
vignettes/stability_files/images/header-bg.jpg
vignettes/stability_files/images/highlight-bg.jpg
vignettes/stability_files/style.css
vignettes/stability_tutorial.ipynb
