plotRecalibration: Plot the recalibration graph.
In sneumann/RMassBank: Workflow to process tandem MS files and build MassBank records
Description
Usage
Arguments
Author(s)
Description
Plot the recalibration graph.
Usage
1
2
3
4
plotRecalibration(w, recalibrateBy = getOption("RMassBank")$recalibrateBy)
plotRecalibration.direct(rcdata, rc, rc.ms1, title, mzrange,
recalibrateBy = getOption("RMassBank")$recalibrateBy)
Arguments
w
The workspace to plot the calibration graph from
recalibrateBy
Whether recalibration was done by ppm ("ppm") or by m/z ("mz").
Important only for graph labeling here.
rcdata
A data frame with columns recalfield and mzFound.
rc
Predictor for MS2 data
rc.ms1
Predictor for MS1 data
title
Prefix for the graph titles
mzrange
m/z value range for the graph
Author(s)
Michele Stravs, Eawag <michael.stravs@eawag.ch>
sneumann/RMassBank documentation built on Oct. 20, 2020, 3:19 p.m.
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Description Usage Arguments Author(s)
Description
Plot the recalibration graph.
Usage
1 2 3 4 | plotRecalibration(w, recalibrateBy = getOption("RMassBank")$recalibrateBy)
plotRecalibration.direct(rcdata, rc, rc.ms1, title, mzrange,
recalibrateBy = getOption("RMassBank")$recalibrateBy)
|
Arguments
w |
The workspace to plot the calibration graph from |
recalibrateBy |
Whether recalibration was done by ppm ("ppm") or by m/z ("mz"). Important only for graph labeling here. |
rcdata |
A data frame with columns |
rc |
Predictor for MS2 data |
rc.ms1 |
Predictor for MS1 data |
title |
Prefix for the graph titles |
mzrange |
m/z value range for the graph |
Author(s)
Michele Stravs, Eawag <michael.stravs@eawag.ch>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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