mzR-package: parser for mzXML, mzData and mzML files (mass spectrometry...

In sneumann/mzR-playground: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)

Description

The mzR package is a library purely for accessing mass spectrometry data in a wide range of formats. Several backend libraries are used, such as the ISB random acces parser (RAMP) for mass spectrometry mzXML, mzData and mzML files. The package contains the original RAMP code written by the ISB, and a subset of the proteowizard library for mzML.

Details

Further information is available in the following vignette:

mzR	mzR, Ramp, mzXML, mzData, mzML (source, pdf)

Author(s)

Bernd Fischer, Steffen Neumann, Laurent Gatto

Maintainers: Bernd Fischer <[e-mail]>, Steffen Neumann <[e-mail]>, Laurent Gatto <[e-mail]>

References

Nat Biotechnol. 2012 Oct 10;30(10):918-20. doi: 10.1038/nbt.2377. A cross-platform toolkit for mass spectrometry and proteomics. Chambers MC, Maclean B, Burke R, Amodei D, Ruderman DL, Neumann S, Gatto L, Fischer B, Pratt B, Egertson J, Hoff K, Kessner D, Tasman N, Shulman N, Frewen B, Baker TA, Brusniak MY, Paulse C, Creasy D, Flashner L, Kani K, Moulding C, Seymour SL, Nuwaysir LM, Lefebvre B, Kuhlmann F, Roark J, Rainer P, Detlev S, Hemenway T, Huhmer A, Langridge J, Connolly B, Chadick T, Holly K, Eckels J, Deutsch EW, Moritz RL, Katz JE, Agus DB, Maccoss M, Tabb DL, Mallick P. http://www.ncbi.nlm.nih.gov/pubmed/23051804

sneumann/mzR-playground documentation built on May 30, 2019, 6 a.m.