plotJn: Plot Jn values

In snowball-project/DESnowball: Bagging with Distance-based Regression for Differential Gene Expression Analyses

Description

Plot the J_n(x) values output from snowball, with significant genes highlighted. See references for more details.

Usage

plotJn(x, fs, pch.nonsig = 21, pch.sig = 19, below.median = T,
  col.above = "red", col.below = "red")

Arguments

x	an output from snowball
fs	the corresponding output from select.features
pch.nonsig	pch of the symbols for non-significant genes. See par for more details
pch.sig	pch of the symbols for significant genes.
below.median	a logical value, set to TRUE if the genes blow the median are to be highlighted
col.above	set the highlight color for genes above the median
col.below	set the highlight color for genes below the median

snowball-project/DESnowball documentation built on May 30, 2019, 6:03 a.m.