Calculate the Synonymous Codon Usage Order (SCUO) index for each gene. Used as a substitute for expression in cases of without expression measurements.
an object of format
This function computes SCUO index for each gene. Typically, this method is completely based on entropy and information theory to estimate expression values of sequences according to their codon information.
SCUO indices are returned.
Wan X.-F., Zhou J., Xu D. “CodonO: a new informatics method for measuring synonymous codon usage bias within and across genomes” International Journal of General Systems Vol. 35, Iss. 1, 2006.
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