data.phylip.pony | R Documentation |
Great pony 524 EIAV dataset is published by Baccam, P., et al. (2003),
and they are also available on NCBI database.
There is a follow-up study, Data Pony 625
.
A text file in phylip format is stored in the data subdirectory.
EIAV rev dataset contains 146 nucleotide sequences and 405 sites.
Belshan, M., et al. (2001).
Phylogenetic Clustering Website: https://snoweye.github.io/phyclust/
Belshan, M., et al. (2001) “Genetic and Biological Variation in Equine Infectious Anemia Virus Rev Correlates with Variable Stages of Clinical Disease in an Experimentally Infected Pony”, Virology, 279, 185-200.
read.fasta
.
## Not run:
library(phyclust, quiet = TRUE)
data.path <- paste(.libPaths()[1], "/phyclust/data/pony524.phy", sep = "")
# edit(file = data.path)
my.pony.524 <- read.phylip(data.path)
str(my.pony.524)
## End(Not run)
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