Description Usage Arguments Value See Also Examples
Plots estimated baseline survival and hazard functions for the surrogate endpoint and the true endpoint from an object of class 'jointSurroPenal'. Confidence bands are allowed.
1 2 3 4 5 |
x |
An object inheriting from |
type.plot |
A character string specifying the type of curve. Possible value are "Hazard", or "Survival". The default is "Hazard". Only the first letters are required, e.g "Haz", "Su". |
conf.bands |
Logical value. Determines whether confidence bands will be plotted. The default is to do so. |
pos.legend |
The location of the legend can be specified by setting this argument to a single keyword from the list '"bottomright"', '"bottom"', '"bottomleft"', '"left"', '"topleft"', '"top"', '"topright"', '"right"' and '"center"'. The default is '"topright"'. |
cex.legend |
Character expansion factor *relative* to current 'par("cex")'. Default is 0.7. |
main |
Title of plot. |
Xlab |
Label of x-axis. Default is '"Time"'. |
Ylab |
Label of y-axis. Default is '"Baseline hazard function"'. |
median |
Logical value. Determines whether survival median will be plotted. Default is TRUE. |
xmin |
Minimum value for x-axis, the default is |
xmax |
Maximum value for x-axis, the default is |
ylim |
Range of y-axis. Default is from 0 to 1. |
endpoint |
A binary that indicates the endpoint to represent. |
scale |
A numeric that allows to rescale (by multiplication) the survival times. If no change is need the argument is set to 1, the default value. eg: 1/365 aims to convert days to years . |
... |
other unused arguments. |
Print a plot of the baseline survival or hazard functions for each type of event or both with the confidence bands or not (conf.bands argument)
jointSurroPenal, jointSurroCopPenal
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 | ## Not run:
###--- Joint surrogate model ---###
###---evaluation of surrogate endpoints---###
data(dataOvarian)
joint.surro.ovar <- jointSurroPenal(data = dataOvarian, n.knots = 8,
init.kappa = c(2000,1000), indicator.alpha = 0,
nb.mc = 200, scale = 1/365)
# Baseline Hazards fonctions for both the surrogate endpoint
# and the true endpoint
plot(joint.surro.ovar,endpoint = 2,type.plot = "Haz", conf.bands = T)
# Baseline survival fonctions for both the surrogate endpoint
# and the true endpoint
plot(joint.surro.ovar,endpoint = 2,type.plot = "Su", conf.bands = T)
## End(Not run)
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