test_that("Tests if coefficient aggregation for linear works", {
context('Tests linear coefficient aggregation')
x <- iris[, c(1,2,3)]
y <- iris[, 4]
x
y
iris
set.seed(275)
# Test linear forestry
forest <- forestry(
x,
y,
ntree = 1,
linear = TRUE,
overfitPenalty = .5
)
# Test prediction using the coefficients from ridge regression
y_pred <- predict(forest, x, aggregation = "coefs")
padded_x <- cbind(x, rep(1, nrow(x)))
# Check using coefficients for prediction
coefficient_pred <- as.matrix(padded_x[17,]) %*% as.matrix((y_pred$coef[17,]))
y_pred$predictions[17]
coefficient_pred[1]
expect_equal(y_pred$predictions[17], coefficient_pred[1], tolerance = 0.1)
# Now check one independent feature case
x <- iris[, 1]
y <- iris[, 2]
# Test linear forestry
forest <- forestry(
x,
y,
ntree = 1,
linear = TRUE,
overfitPenalty = .5
)
# Test prediction using the coefficients from ridge regression
y_pred <- predict(forest, x, aggregation = "coefs")
padded_x <- cbind(data.frame(x), rep(1, length(x)))
# Check using coefficients for prediction
coefficient_pred <- as.matrix(padded_x[25,]) %*% as.matrix((y_pred$coef[25,]))
coefficient_pred[1]
y_pred$predictions[25]
expect_equal(y_pred$predictions[25], coefficient_pred[1], tolerance = 0.1)
})
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