rprimer-package: rprimer: Design Degenerate Oligos from a Multiple DNA...

rprimer-packageR Documentation

rprimer: Design Degenerate Oligos from a Multiple DNA Sequence Alignment

Description

Functions, workflow and a Shiny application for visualizing sequence conservation and designing degenerate primers, probes, and (RT)-(q/d)PCR assays from a multiple DNA sequence alignment. The results can be presented in data frame format and visualized as dashboard-like plots. For more information, please see the package vignette.

Details

The package contains five functions: consensusProfile(), designOligos(), designAssays(), checkMatch() and plotData()

Author(s)

Maintainer: Sofia Persson sofiapersson27@gmail.com (ORCID)

See Also

Useful links:


sofpn/rprimer documentation built on July 2, 2023, 7:15 a.m.