songbiostat/MiAF: Microbiome Adaptive Fisher Test

Test for overall association between the composition of a microbial community and a host phenotype of interest (e.g. disease status) with/without covariate adjustments. In this package, we construct a novel community-level test, named MiAF, by adaptively combining p-values from OTU-level (univariate) tests.

Getting started

Package details

MaintainerQingyu Chen <chen.8429@osu.edu>
LicenseGPL (>= 2)
Version1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("songbiostat/MiAF")
songbiostat/MiAF documentation built on Feb. 18, 2022, 10:29 p.m.