select.com: Associated taxa selected by combining p-values of four tests...

In songbiostat/MiAF: Microbiome Adaptive Fisher Test

Description

Associated taxa selected by combining p-values of four tests using different abundance representations

Usage

select.com(sel.unweight, sel.weight, sel.5, sel.tip, com)

Arguments

sel.unweight	The list of selected associated taxa by unweighted UniFrac-like test.
sel.weight	The list of selected associated taxa by weighted UniFrac-like test.
sel.5	The list of selected associated taxa by generalized UniFrac-like test.
sel.tip	The list of selected associated taxa by leaf-nodes-only test.
com	The index of selected tests using different abundance representations. 1: unweighted UniFrac-like test. 2: weighted UniFrac-like test. 3: generalized UniFrac-like test. 4: leaf-nodes-only test.

Value

A list of selected associated taxa after combining four using different abundance representations:

lower	Under-presented taxa based on lower-tail p-values.
upper	Over-presented taxa based on upper-tail p-values.

songbiostat/MiAF documentation built on Feb. 18, 2022, 10:29 p.m.