plot_density: Generate density plot

In soniamitchell/SpARKjags:

Generate density plot

Description

Generates a violin plot where violins represent the posterior probability of resistance and points represent the calculated probability of resistance to each antibiotic class. If a file already exists, it is read into memory.

Usage

plot_density(model, data, save_to, filename, save_pdf = FALSE)

Arguments

model	a runjags object containing model results
data	a list containing the data input for the runjags model, generated with jags_data()
save_to	a string specifying the location in which the output (an rds file containing the density plot) should be saved
filename	a string specifying the name of the output (an rds file containing the density plot)
save_pdf	a boolean specifying whether or not a pdf should be saved

Value

Returns a density plot and saves an rds file

soniamitchell/SpARKjags documentation built on May 5, 2022, 12:09 p.m.