mcnemar_test.result_snps | R Documentation |
mcnemar test
## S3 method for class 'result_snps'
mcnemar_test(
roh = "object of class result_snps (output of function roh with fun=sum)",
reference,
w = 10,
...
)
roh |
An object of class result_snps (output of function roh with fun=sum) |
reference |
reference group of subjects in which we want to perform fisher test. |
w |
window size |
... |
other variables |
the output will be a test_snps (data.table) object including 3 columns: “snp_pos”, “case_control”, and “value” which is a p-values.
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