plot_cluster_relations: Plot A Bar Graph Representing Gene Expression Relationships...
In sotaro0214/seuratter: Assists The Current Single Cell RNA Sequencing Analysis Workflow
Description
Usage
Arguments
Value
Examples
Description
Plot a bar graph representing the gene expression relationships between clusters. Each bar represents
how much genes are shared in the pair with respect to other pairs. Because the relationships are made
relative to each other, the cluster pair with the most genes shared will be indicated as 1.
Usage
1
plot_cluster_relations(gene_expression_graph)
Arguments
gene_expression_graph
Graph output from draw_cluster_relations to utilize the edge weights
Value
Returns a bar graph indicating which cluster pairs share the more genes with respect to
the pair with the most genes shared.
Examples
1
2
3
4
5
library(igraph)
library(utils)
library(graphics)
graph <- draw_cluster_gene_relations(gene_comparison_matrix)
plot_cluster_relations(graph)
sotaro0214/seuratter documentation built on Dec. 8, 2019, 4:24 p.m.
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Description Usage Arguments Value Examples
Description
Plot a bar graph representing the gene expression relationships between clusters. Each bar represents how much genes are shared in the pair with respect to other pairs. Because the relationships are made relative to each other, the cluster pair with the most genes shared will be indicated as 1.
Usage
1 | plot_cluster_relations(gene_expression_graph)
|
Arguments
gene_expression_graph |
Graph output from draw_cluster_relations to utilize the edge weights |
Value
Returns a bar graph indicating which cluster pairs share the more genes with respect to the pair with the most genes shared.
Examples
1 2 3 4 5 | library(igraph)
library(utils)
library(graphics)
graph <- draw_cluster_gene_relations(gene_comparison_matrix)
plot_cluster_relations(graph)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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