Files in spatial-ews/spatialwarnings
Spatial Early Warning Signals of Ecosystem Degradation

.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/000_package_options.R R/RcppExports.R R/checks.R R/clustering.R R/coarse_graining.R R/convert_matrix.R R/datasets.R R/deprecation.R R/display_matrix.R R/extra_doc.R R/fitpsd.R R/helpers.R R/indicator_plrange.R R/indicator_psdtype.R R/indictest.R R/label.R R/lsw_sews.R R/null_model_helpers.R R/roxygen-tags.R R/simple_indic.R R/simple_indic_indictest.R R/simple_indic_methods.R R/spatialwarnings-deprecated.R R/spatialwarnings.R R/task_flowlength.R R/task_generic_indic.R R/task_kbdm.R R/task_patch_indic.R R/task_patch_indic_indictest.R R/task_patch_indic_methods.R R/task_spectral_indic.R R/task_spectral_indic_methods.R R/task_variogram_indic.R R/task_variogram_indic_indictest.R README.md
codecov.yml
cran-comments.md data-raw/rodriguez_et_al.R
data-raw/rodriguez_etal/AZ-P1.csv
data-raw/rodriguez_etal/AZ-P1.jpg
data-raw/rodriguez_etal/AZ-P2.csv
data-raw/rodriguez_etal/AZ-P2.jpg
data-raw/rodriguez_etal/AZ-P3.csv
data-raw/rodriguez_etal/AZ-P3.jpg
data-raw/rodriguez_etal/AZ-P4.csv
data-raw/rodriguez_etal/AZ-P4.jpg
data-raw/rodriguez_etal/AZ-P5.csv
data-raw/rodriguez_etal/AZ-P5.jpg
data-raw/rodriguez_etal/AZ-P6.csv
data-raw/rodriguez_etal/AZ-P6.jpg
data-raw/rodriguez_etal/banded/AU-P1.jpg
data-raw/rodriguez_etal/banded/AU-P2.jpg
data-raw/rodriguez_etal/banded/AU-P3.jpg
data-raw/rodriguez_etal/banded/AU-P4.jpg
data-raw/rodriguez_etal/banded/AU-P5.jpg
data-raw/rodriguez_etal/banded/AU-P6.jpg
data-raw/rodriguez_etal/fl_octave_run.m
data-raw/serengeti.R
data-raw/serengeti/matrices/matrixa.txt
data-raw/serengeti/matrices/matrixb.txt
data-raw/serengeti/matrices/matrixc.txt
data-raw/serengeti/matrices/matrixd.txt
data-raw/serengeti/matrices/matrixe.txt
data-raw/serengeti/matrices/matrixf.txt
data-raw/serengeti/matrices/matrixg.txt
data-raw/serengeti/matrices/matrixh.txt
data-raw/serengeti/matrices/matrixi.txt
data-raw/serengeti/matrices/matrixj.txt
data-raw/serengeti/matrices/matrixk.txt
data-raw/serengeti/matrices/matrixl.txt
data-raw/serengeti/matrices/matrixm.txt
data-raw/serengeti/matrices/matrixn.txt
data-raw/serengeti/matrices/matrixo.txt
data-raw/serengeti/matrices/matrixp.txt
data-raw/serengeti/matrices/matrixq.txt
data-raw/serengeti/matrices/matrixr.txt
data-raw/serengeti/matrices/matrixs.txt
data-raw/serengeti/serengeti_rain.dat
data/arizona.rda
data/dda.pars.rda
data/dda.rda
data/forestgap.pars.rda
data/forestgap.rda
data/serengeti.rain.rda
data/serengeti.rda
draft/code_FL_planar_slope/fl_octave_run.m
draft/demo_moran.R draft/example.R draft/kolmcomp.R
draft/workflow.jpg
inst/CITATION
man/arizona.Rd man/coarse_grain.Rd man/convert_to_matrix.Rd man/create_indicator.Rd man/dLSW.Rd man/dda.Rd man/display_matrix.Rd man/extract_spectrum.Rd man/extract_variogram.Rd man/flowlength_sews.Rd man/forestgap.Rd man/generic_sews.Rd man/indicator_plrange.Rd man/indicator_psdtype.Rd man/indictest.Rd man/kbdm_sews.Rd man/label.Rd man/lsw_sews.Rd man/patchdistr_sews.Rd man/patchdistr_sews_plot.Rd man/patchdistr_sews_predict.Rd man/patchsizes.Rd man/pl_fit.Rd man/plot_spectrum.Rd man/raw_cg_moran.Rd man/raw_cg_skewness.Rd man/raw_cg_variance.Rd man/raw_clustering.Rd man/raw_flowlength_uniform.Rd man/raw_kbdm.Rd man/raw_moran.Rd man/raw_plrange.Rd man/raw_sdr.Rd man/raw_structvar.Rd man/raw_variogram_metrics.Rd man/reexports.Rd man/rspectrum.Rd man/serengeti.Rd man/simple_sews.Rd man/simple_sews_methods.Rd man/spatialwarnings.Rd man/spectral_sews.Rd man/variogram_sews.Rd man/variogram_sews_plot.Rd man/variogram_sews_predict.Rd man/xmin_estim.Rd
src/.gitignore
src/RcppExports.cpp
src/clustering.cpp
src/coarse_graining.cpp
src/correlated_shuffling.bak
src/discpowerexp.cpp
src/flowlength_internal.cpp
src/headers.h
src/label.cpp
src/moran_correlation.cpp
src/norm_constants.cpp
src/null_computation.cpp
src/rspectrum.cpp
src/skewness.cpp
src/spatialwarnings.h
src/variogram.cpp
src/zeta.cpp
tests/testthat.R
tests/testthat/kbdm_data/scale-free/CA_b0.39.txt
tests/testthat/kbdm_data/scale-free/CA_b0.4.txt
tests/testthat/kbdm_data/scale-free/CA_b0.41.txt
tests/testthat/kbdm_data/scale-free/CA_b0.42.txt
tests/testthat/kbdm_data/scale-free/CA_b0.43.txt
tests/testthat/kbdm_data/scale-free/CA_b0.44.txt
tests/testthat/kbdm_data/scale-free/CA_b0.45.txt
tests/testthat/kbdm_data/scale-free/CA_b0.46.txt
tests/testthat/kbdm_data/scale-free/CA_b0.47.txt
tests/testthat/kbdm_data/scale-free/CA_b0.48.txt
tests/testthat/kbdm_data/scale-free/CA_b0.49.txt
tests/testthat/kbdm_data/scale-free/CA_b0.5.txt
tests/testthat/kbdm_data/scale-free/CA_b0.51.txt
tests/testthat/kbdm_data/scale-free/CA_b0.52.txt
tests/testthat/kbdm_data/scale-free/CA_b0.53.txt
tests/testthat/kbdm_data/scale-free/CA_b0.54.txt
tests/testthat/kbdm_data/scale-free/CA_b0.55.txt
tests/testthat/kbdm_data/scale-free/CA_b0.56.txt
tests/testthat/kbdm_data/scale-free/CA_b0.57.txt
tests/testthat/kbdm_data/scale-free/CA_b0.58.txt
tests/testthat/kbdm_data/scale-free/CA_b0.59.txt
tests/testthat/kbdm_data/scale-free/CA_b0.6.txt
tests/testthat/kbdm_data/scale-free/CA_b0.61.txt
tests/testthat/kbdm_data/scale-free/CA_b0.62.txt
tests/testthat/kbdm_data/scale-free/CA_b0.63.txt
tests/testthat/kbdm_data/scale-free/CA_b0.64.txt
tests/testthat/kbdm_data/scale-free/CA_b0.65.txt
tests/testthat/kbdm_data/scale-free/CA_b0.66.txt
tests/testthat/kbdm_data/scale-free/CA_b0.67.txt
tests/testthat/kbdm_data/scale-free/CA_b0.68.txt
tests/testthat/kbdm_data/scale-free/CA_b0.69.txt
tests/testthat/kbdm_data/scale-free/CA_b0.7.txt
tests/testthat/kbdm_data/scale-free/CA_b0.71.txt
tests/testthat/kbdm_data/scale-free/CA_b0.72.txt
tests/testthat/kbdm_data/scale-free/extracted_data.csv
tests/testthat/pli-R-v0.0.3-2007-07-25/README
tests/testthat/pli-R-v0.0.3-2007-07-25/discexp.R tests/testthat/pli-R-v0.0.3-2007-07-25/disclnorm.R tests/testthat/pli-R-v0.0.3-2007-07-25/discpowerexp.R
tests/testthat/pli-R-v0.0.3-2007-07-25/discpowerexp.c
tests/testthat/pli-R-v0.0.3-2007-07-25/discweib.R tests/testthat/pli-R-v0.0.3-2007-07-25/exp.R
tests/testthat/pli-R-v0.0.3-2007-07-25/exponential-integral.tgz
tests/testthat/pli-R-v0.0.3-2007-07-25/exponential-integral/Makefile
tests/testthat/pli-R-v0.0.3-2007-07-25/exponential-integral/exp_int.c
tests/testthat/pli-R-v0.0.3-2007-07-25/lnorm.R tests/testthat/pli-R-v0.0.3-2007-07-25/pareto.R tests/testthat/pli-R-v0.0.3-2007-07-25/poisson.R tests/testthat/pli-R-v0.0.3-2007-07-25/power-law-test.R tests/testthat/pli-R-v0.0.3-2007-07-25/powerexp-exponential-integral.R tests/testthat/pli-R-v0.0.3-2007-07-25/powerexp.R tests/testthat/pli-R-v0.0.3-2007-07-25/weibull.R tests/testthat/pli-R-v0.0.3-2007-07-25/yule.R
tests/testthat/pli-R-v0.0.3-2007-07-25/zeta-function.tgz
tests/testthat/pli-R-v0.0.3-2007-07-25/zeta-function/Makefile
tests/testthat/pli-R-v0.0.3-2007-07-25/zeta-function/zeta_func.c
tests/testthat/pli-R-v0.0.3-2007-07-25/zeta.R
tests/testthat/plosone/CA_all.txt
tests/testthat/plosone/early_warning_generic_R_code.R
tests/testthat/rodriguez2018/extracted_fl_images.csv
tests/testthat/rodriguez2018/fl_approx_values.txt
tests/testthat/rodriguez2018/images/AU-P1.csv
tests/testthat/rodriguez2018/images/AU-P2.csv
tests/testthat/rodriguez2018/images/AU-P3.csv
tests/testthat/rodriguez2018/images/AU-P4.csv
tests/testthat/rodriguez2018/images/AU-P5.csv
tests/testthat/rodriguez2018/images/AU-P6.csv
tests/testthat/rodriguez2018/images/AZ-P1.csv
tests/testthat/rodriguez2018/images/AZ-P2.csv
tests/testthat/rodriguez2018/images/AZ-P3.csv
tests/testthat/rodriguez2018/images/AZ-P4.csv
tests/testthat/rodriguez2018/images/AZ-P5.csv
tests/testthat/rodriguez2018/images/AZ-P6.csv
tests/testthat/rodriguez2018/rawdata/snapshot_b055.txt
tests/testthat/rodriguez2018/rawdata/snapshot_b057.txt
tests/testthat/rodriguez2018/rawdata/snapshot_b067.txt
tests/testthat/test-clustering.R tests/testthat/test-coarse_graining.R tests/testthat/test-custom_indicator.R tests/testthat/test-deprecated.R tests/testthat/test-display_matrix.R tests/testthat/test-flowlength.R tests/testthat/test-indicator_values-plosone.R tests/testthat/test-indicator_values.R tests/testthat/test-kbdm.R tests/testthat/test-label.R tests/testthat/test-list-methods.R tests/testthat/test-lsw.R tests/testthat/test-moran.R tests/testthat/test-nullfun.R tests/testthat/test-parallelism.R tests/testthat/test-patches.R tests/testthat/test-psd-predict.R tests/testthat/test-psdfit.R tests/testthat/test-size-reporting.R tests/testthat/test-skewness.R tests/testthat/test-spectrum.R tests/testthat/test-tplnorm.R tests/testthat/test-variogram.R tests/testthat/test-workflows.R tests/testthat/test-xminest.R
tools/export_Rforge.sh
tools/imgs/non_patterned_spain.png
tools/imgs/patterned_bush_niger.png
tools/imgs/serengeti_example.png
tools/pkg_check.R
spatial-ews/spatialwarnings documentation built on June 2, 2025, 12:15 a.m.