summarize_nejm_horz: Create a summarization for a categorical set of column versus...

In spgarbet/tangram: The Grammar of Tables

Create a summarization for a categorical set of column versus a numerical row in NEJM style

Description

Given a row and column object from the parser apply a Kruskal test and output the results horizontally. 5 X (n + no. categories + test statistic)

Usage

summarize_nejm_horz(
  table,
  row,
  column,
  cell_style,
  pformat = NULL,
  msd = FALSE,
  quant = c(0.25, 0.5, 0.75),
  overall = NULL,
  test = FALSE,
  useNA = "no",
  ...
)

Arguments

table	The table object to modify
row	The row variable object to use (numerical)
column	The column variable to use (categorical)
cell_style	list; cell styling functions
pformat	numeric, character or function; A formatting directive to be applied to p-values
msd	logical; Include mean and standard deviation with quantile statistics
quant	numeric; Vector of quantiles to include. Should be an odd number since the middle value is highlighted on display.
overall	logical or character; Include overall summary statistics for a categorical column. Character values are assumed to be true and used as column header.
test	logical or function; include statistical test results. Function signature must be function(row, col, cell_style, ...)
useNA	character; Specifies whether to include NA counts in the table. The allowed values correspond to never "no" (Default), only if the count is positive "ifany" and even for zero counts "always". An NA column is always excluded.
...	absorbs additional arugments. Unused at present.

Value

The modified table object

spgarbet/tangram documentation built on Feb. 12, 2023, 7:13 p.m.