Description Usage Arguments Value
Designed to be run from the direcrory where the data is.
1 2 3 4 5 6 7 8 9 10 | orbis.save.rds(txt.file.name, txt.file.dir = getwd(),
data.codes.file = character(0), data.codes.dir = file.path(getwd(),
"orbis-var-names"), select.codes = character(0), txt.skip.lines = 2,
txt.nlines = NA, batch.nlines = 10^7,
batch.file.dir = character(0), batch.file.name = character(0),
batch.file.name.prefix = "", batch.file.name.sufix = "",
save.rds = TRUE, return.invisible = FALSE,
harmonize.cols = character(0), harmonize.progress.by = 10^5,
harmonize.quite = FALSE, harmonize.procedures = list(list("toascii",
FALSE), "remove.brackets", "toupper", "apply.nber", "remove.spaces"))
|
txt.file.name |
File name of raw Orbis data |
txt.file.dir |
A path to directory with raw data. Default is working directory. |
data.codes.file |
Name of the .csv file with codes. Default is the same as txt.file.name but with .csv |
data.codes.dir |
A path to .csv file with codes. Default is ./orbis-var-names |
select.codes |
A character vector with felds (code) to select. Default is all. |
txt.skip.lines |
The header of raw data. The default is 2. |
txt.nlines |
Number of lined in the raw data file. Default is calculate with grep |
batch.nlines |
Number of lines to read in batch. The default is 10^7 |
batch.file.dir |
Path for saving .rds files. The default is dir same as 'txt.file.name' |
harmonize.cols |
Which columns to harmonize. (Requires harmonizer package.) |
harmonize.progress.by |
(Requires harmonizer package.) Numeric value that is used to split the org.names vector for showing percentage of completion. Default is 0 meaning not to split the vector and thus does not show progress percentage. Designed to be used for long strings. |
harmonize.quite |
(Requires harmonizer package.) Logical value indicating whether or not print messages about procedures progress. |
harmonize.procedures |
(Requires harmonizer package.) List of harmonization procedures. Each procedure can be specified as a string representing procedure name (see details for procedure names) or as a list where the first element should be procedure name (string) and other elements will passed as arguments to this procedure. |
A vector of .rds file names.
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