API for statOmics/msqrob2
Robust statistical inference for quantitative LC-MS proteomics
| Global functions | |
|---|---|
| .StatModel | Man page |
| .chrlinfct2matrix | Source code |
| .expression2coef | Source code |
| .ridge_msqrobLmer | Source code |
| StatModel | Man page Source code |
| StatModel-class | Man page |
| StatModel-method | Man page |
| data | Man page |
| getCoef | Man page |
| getCoef,StatModel-method | Man page |
| getContrast | Man page |
| getContrast,StatModel-method | Man page |
| getDF | Man page |
| getDF,StatModel-method | Man page |
| getDfPosterior | Man page |
| getDfPosterior,StatModel-method | Man page |
| getFitMethod | Man page |
| getFitMethod,StatModel-method | Man page |
| getModel | Man page |
| getModel,StatModel-method | Man page |
| getSigma | Man page |
| getSigma,StatModel-method | Man page |
| getSigmaPosterior | Man page |
| getSigmaPosterior,StatModel-method | Man page |
| getVar | Man page |
| getVar,StatModel-method | Man page |
| getVarPosterior | Man page |
| getVarPosterior,StatModel-method | Man page |
| getVcovUnscaled | Man page |
| getVcovUnscaled,StatModel-method | Man page |
| hypothesisTest | Man page |
| hypothesisTest,QFeatures-method | Man page |
| hypothesisTest,SummarizedExperiment-method | Man page |
| hypothesisTestHurdle | Man page |
| hypothesisTestHurdle,QFeatures-method | Man page |
| hypothesisTestHurdle,SummarizedExperiment-method | Man page |
| makeContrast | Man page Source code |
| msqrob | Man page |
| msqrob,QFeatures-method | Man page |
| msqrob,SummarizedExperiment-method | Man page |
| msqrobAggregate | Man page |
| msqrobAggregate,QFeatures-method | Man page |
| msqrobAggregate,SummarizedExperiment-method | Man page |
| msqrobGlm | Man page |
| msqrobHurdle | Man page |
| msqrobHurdle,QFeatures-method | Man page |
| msqrobHurdle,SummarizedExperiment-method | Man page |
| msqrobLm | Man page Source code |
| msqrobLmer | Man page Source code |
| msqrobQB | Man page |
| msqrobQB,QFeatures-method | Man page |
| msqrobQB,SummarizedExperiment-method | Man page |
| pe | Man page |
| show,StatModel-method | Man page |
| smallestUniqueGroups | Man page Source code |
| statModelAccessors | Man page |
| statModelMethods | Man page |
| topFeatures | Man page Source code |
| varContrast | Man page |
| varContrast,StatModel-method | Man page |
