islamEset: single-cell gene expression in mouse fibroblasts and...
In statOmics/zingeR: Zero-Inflated Negative binomial Gene Expression in R
Description
Usage
Format
References
Description
The Islam dataset considers $44$ embryonic fibroblasts and $48$ embryonic stem cells in mouse. The original dataset was downloaded from the Gene Expression Omnibus (https://www.ncbi.nlm.nih.gov/geo) with accession number GSE29087. Control wells and genes with positive counts in fewer than 5 cells were removed.
Usage
1
Format
An object of class ExpressionSet with 11796 rows and 92 columns.
References
Saiful Islam, Una Kja <cc><88>llquist, Annalena Moliner, Pawel Zajac, Jian-Bing Fan, Peter L <cc><88>onnerberg, and Sten Linnarsson. Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq. Genome research, 21(7):1160<e2><80><93>7, jul 2011.
statOmics/zingeR documentation built on May 20, 2019, 6:48 p.m.
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Description Usage Format References
Description
The Islam dataset considers $44$ embryonic fibroblasts and $48$ embryonic stem cells in mouse. The original dataset was downloaded from the Gene Expression Omnibus (https://www.ncbi.nlm.nih.gov/geo) with accession number GSE29087. Control wells and genes with positive counts in fewer than 5 cells were removed.
Usage
1 |
Format
An object of class ExpressionSet with 11796 rows and 92 columns.
References
Saiful Islam, Una Kja <cc><88>llquist, Annalena Moliner, Pawel Zajac, Jian-Bing Fan, Peter L <cc><88>onnerberg, and Sten Linnarsson. Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq. Genome research, 21(7):1160<e2><80><93>7, jul 2011.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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