calculate_p: Calculating p function
In statdivlab/happi: a hierarchical approach to pangenomics inference
calculate_p R Documentation
Calculating p function
Description
Calculating p function
Usage
calculate_p(xbeta, ff, epsilon, outcome)
Arguments
xbeta
my fitted betas matrix multiplied by covariate
ff
my estimated f's
epsilon
probability of observing a gene when it should be absent; probability between 0 and 1
outcome
length-n vector; this is the vector of a target gene's presence/absence; should be coded as 0 or 1
Value
a vector of probabilities
statdivlab/happi documentation built on April 19, 2024, 2:04 a.m.
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| calculate_p | R Documentation |
Calculating p function
Description
Calculating p function
Usage
calculate_p(xbeta, ff, epsilon, outcome)
Arguments
xbeta |
my fitted betas matrix multiplied by covariate |
ff |
my estimated f's |
epsilon |
probability of observing a gene when it should be absent; probability between 0 and 1 |
outcome |
length-n vector; this is the vector of a target gene's presence/absence; should be coded as 0 or 1 |
Value
a vector of probabilities
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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