Man pages for statdivlab/tinyvamp
Modeling complex measurement error in microbiome experiments
| bootstrap_ci | Apply the Bayesian subsampled bootstrap to a fitted tinyvamp... |
| calculate_log_penalty | Calculate barrier penalty to add to objective function inside... |
| costea2017_mock_composition | The composition of 10 spike-in taxa in 19 samples observed... |
| dataframes_to_parameters | Convert parameter values stored in data frame format to... |
| estimate_parameters | Fit tinyvamp model to HTS microbiome data |
| mu_d_beta | Calculate derivative of mu_ij with respect to B |
| mu_d_gamma | Calculate derivative of mu_ij with respect to ith entry of... |
| mu_d_gamma_tilde | Calculate derivative of mu_ij with respect to an entry of... |
| mu_d_P | Calculate derivative of mu_ij with respect to an entry of P |
| mu_d_rho_faster | Calculate derivative of mu_ij with respect to a row of... |
| mu_d_rho_tilde_faster | Calculate derivative of mu_i with respect to a row of... |
