stefanedwards/Siccuracy: Pipeline Package for AlphaImpute
Resources for manipulating genotype files in AlphaImpute format, calculating imputation accuracies (both correlations and correctly imputed) across both samples and SNPs, and calculating heterozygosities. Also features converting PLINK files, reading SHAPEIT and Oxford formatted files, and calculating imputation accuracies on these.
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | GPL-2 | GPL-3 |
| Version | 0.8.0 |
| URL | https://github.com/stefanedwards/Siccuracy |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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