Files in stemangiola/tidyseurat
Brings Seurat to the Tidyverse
.Rbuildignore
.coveralls.yml
.github/.gitignore
.github/ISSUE_TEMPLATE/bug_report.md
.github/workflows/rworkflows.yml
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/attach.R
R/data.R
R/dplyr_methods.R
R/ggplot2_methods.R
R/methods.R
R/methods_DEPRECATED.R
R/pillar_utilities.R
R/plotly_methods.R
R/print_method.R
R/tibble_methods.R
R/tidyr_methods.R
R/utilities.R
R/utils-pipe.R
R/zzz.R
README.Rmd
README.md
_pkgdown.yml
codecov.yml
data/cell_type_df.rda
data/pbmc_small_nested_interactions.rda
dev/Thumbs.db
dev/code_comparison.Rmd
dev/gating.png
dev/plot_seurat_structure.R
dev/plotly.png
dev/seurat_structure.png
dev/seurat_structure_square.png
dev/test_scrna_for_tidyseurat.rdata
dev/tidyseurat_structure.png
dev/tidyseurat_structure_square.png
dev/use_cases_BioCAsia2021.R
dev/workflow_article.R
dev/workflow_create_integrated_pbmc.R
dev/workflow_figures.R
inst/CITATION
inst/NEWS.rd
inst/Thumbs.db
inst/logo.png
inst/logo.svg
inst/logo_source_no_outline.svg
man/add_class.Rd
man/aggregate_cells.Rd
man/arrange.Rd
man/as_tibble.Rd
man/bind_rows.Rd
man/cell_type_df.Rd
man/count.Rd
man/distinct.Rd
man/drop_class.Rd
man/extract.Rd
man/figures/.DS_Store
man/figures/lifecycle-archived.svg
man/figures/lifecycle-defunct.svg
man/figures/lifecycle-deprecated.svg
man/figures/lifecycle-experimental.svg
man/figures/lifecycle-maturing.svg
man/figures/lifecycle-questioning.svg
man/figures/lifecycle-soft-deprecated.svg
man/figures/lifecycle-stable.svg
man/figures/lifecycle-superseded.svg
man/figures/logo_interaction-01.png
man/figures/markers_v4-1.png
man/figures/pc_plot-1.png
man/figures/plot1-1.png
man/figures/plot2-1.png
man/figures/plotly.png
man/figures/unnamed-chunk-12-1.png
man/figures/unnamed-chunk-14-1.png
man/figures/unnamed-chunk-15-1.png
man/figures/unnamed-chunk-16-1.png
man/figures/unnamed-chunk-17-1.png
man/figures/unnamed-chunk-18-1.png
man/figures/unnamed-chunk-19-1.png
man/figures/unnamed-chunk-20-1.png
man/figures/unnamed-chunk-22-1.png
man/filter.Rd
man/formatting.Rd
man/fragments/intro.Rmd
man/fragments/intro_files/figure-html/markers_v4-1.png
man/fragments/intro_files/figure-html/pc_plot-1.png
man/fragments/intro_files/figure-html/plot1-1.png
man/fragments/intro_files/figure-html/plot2-1.png
man/fragments/intro_files/figure-html/unnamed-chunk-9-1.png
man/full_join.Rd
man/get_abundance_sc_long.Rd
man/get_abundance_sc_wide.Rd
man/ggplot.Rd
man/glimpse.Rd
man/group_by.Rd
man/group_split.Rd
man/inner_join.Rd
man/join_features.Rd
man/join_transcripts.Rd
man/left_join.Rd
man/mutate.Rd
man/nest.Rd
man/pbmc_small_nested_interactions.Rd
man/pipe.Rd
man/pivot_longer.Rd
man/plotly.Rd
man/pull.Rd
man/quo_names.Rd
man/rename.Rd
man/return_arguments_of.Rd
man/right_join.Rd
man/rowwise.Rd
man/sample_n.Rd
man/select.Rd
man/separate.Rd
man/slice.Rd
man/summarise.Rd
man/tbl_format_header.Rd
man/tidy.Rd
man/unite.Rd
man/unnest.Rd
tests/testthat.R
tests/testthat/test-dplyr.R
tests/testthat/test-ggplotly_methods.R
tests/testthat/test-methods.R
tests/testthat/test-pillar.R
tests/testthat/test-print.R
tests/testthat/test-tidyr.R
tests/testthat/test-utilities.R
vignettes/figures_article.Rmd
vignettes/introduction.Rmd
vignettes/tidyseurat.bib
