get_abundance_sc_long: get abundance long

In stemangiola/tidyseurat: Brings Seurat to the Tidyverse

get abundance long

Description

get abundance long

Usage

get_abundance_sc_long(
  .data,
  features = NULL,
  all = FALSE,
  exclude_zeros = FALSE,
  assay = Assays(.data),
  slot = "data"
)

Arguments

.data	A tidyseurat
features	A character
all	A boolean
exclude_zeros	A boolean
assay	assay name to extract feature abundance
slot	slot in the assay, e.g. 'data' and 'scale.data'

Value

A Seurat object

Examples

data(pbmc_small)
pbmc_small %>%
  get_abundance_sc_long(features=c("HLA-DRA", "LYZ"))

stemangiola/tidyseurat documentation built on March 8, 2024, 1:18 a.m.