sample_ancestry_: sample_ancestry_
In stephenbates19/digitaltwins: Causal inference for SNPs
Description
Usage
Arguments
Value
Description
Sample the latent state of ancenstry indicators for a haplotype given
its two ancestral haplotypes.
Usage
1
sample_ancestry_(x, p1, p2, d, p, lambda, epsilon)
Arguments
x
0-1 vector of length p giving the offspring haplotypes
p1
0-1 vector of length p giving one parental haplotype
p2
0-1 vector of length p giving the other parental haplotype
d
numberic vector of length p - 1 giving the distance between each site
p
length of the vector x
lambda
the recombination rate, a multiplier for the distance d
epsilon
the pointwise mutation rate
Value
a vector of of the ancestral states
stephenbates19/digitaltwins documentation built on Feb. 25, 2020, 12:41 a.m.
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Description Usage Arguments Value
Description
Sample the latent state of ancenstry indicators for a haplotype given its two ancestral haplotypes.
Usage
1 | sample_ancestry_(x, p1, p2, d, p, lambda, epsilon)
|
Arguments
x |
0-1 vector of length p giving the offspring haplotypes |
p1 |
0-1 vector of length p giving one parental haplotype |
p2 |
0-1 vector of length p giving the other parental haplotype |
d |
numberic vector of length p - 1 giving the distance between each site |
p |
length of the vector x |
lambda |
the recombination rate, a multiplier for the distance d |
epsilon |
the pointwise mutation rate |
Value
a vector of of the ancestral states
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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