dot-mapFeatures: Map ranges to genes using features as an anchor

In steveped/extraChIPs: Additional functions for working with ChIP-Seq data

Map ranges to genes using features as an anchor

Description

Map ranges to genes using features as an anchor

Usage

.mapFeatures(.gr, .feat, .genes, .cols, .gr2feat, .feat2gene, ...)

Arguments

.gr	The ranges to map onto
.feat	Features to use for mapping
.genes	GRanges object containing gene-level information
.cols	The columns from .genes to map onto .gr
.gr2feat	The maximum distance between ranges and features
.feat2gene	The maximum distance between features & genes
...	Passed to findOverlaps and subsetByOverlaps

Value

A data.frame

steveped/extraChIPs documentation built on Aug. 1, 2024, 12:36 a.m.