NEWS.md

In steverozen/ICAMSxtra: ICAMSxtra

ICAMSxtra 0.1.0

• Removed the following exported functions as they are moved to another package mSigAct:
• ReadExposure
• SortExposure
• WriteExposure
• PlotExposure
• PlotExposureToPdf

ICAMSxtra 0.0.8

• Added new exported function TP_FP_FN_avg_sim.

ICAMSxtra 0.0.7

• Fixed a bug in plotting exposure legend angle and density.

ICAMSxtra 0.0.6

• Fixed bugs related to usage of package data catalog.row.order$ID115.

ICAMSxtra 0.0.5

• Updated code not to use deprecated functions in ICAMS.

ICAMSxtra 0.0.4

Added

• Added an extra argument row.names in function WriteExposure.

• Added extra argument cex.yaxis, cex.xaxis, plot.sample.names and yaxis.labels in functions PlotExposureInternal, PlotExposure and PlotExposureToPdf.

• Added extra argument width, height in function PlotExposureToPdf.

Fixed

• Fixed a bug in function PlotExposure when the number of columns in exposure matrix is less than samples.per.line.

• Fixed a bug in function PlotExposureInternal when user provides specified y axis label.

• Fixed a bug in function PlotExposureInternal when user provides specified space (as a fraction of the average bar width) left before each bar.

• Fixed a bug in function PlotExposureInternal when user provides specified density of shading lines for the bars.

ICAMSxtra 0.0.3

Added

• Extra argument mean.weighted for functions MeanOfSpectraAsSig and PlotSpectraAsSigsWithUncertainty.

• New dependency packages boot and simpleboot.

• New internal function CalculateConfidenceInterval to calculate bootstrap confidence interval.

• Extra argument conf.int in function PlotSpectraAsSigsWithUncertainty to plot the error bars as confidence interval for the mean.

• Extra argument num.of.bootstrap.replicates in exported function PlotSpectraAsSigsWithUncertainty.

ICAMSxtra 0.0.2

Added

• Functions for matching sets of signatures (see match.sigs.R).

ICAMSxtra 0.0.1

Added

• Functions for reading, writing, sorting and plotting exposures were added: ReadExposure, WriteExposure, SortExposure, PlotExposure, PlotExposureToPdf.

• Various functions generating, analyzing and plotting ID115 catalogs. See the reference manual for more details.

steverozen/ICAMSxtra documentation built on Feb. 9, 2022, 7:01 a.m.