API for stranda/holoSimCell
Linked demographic/genetic simulation

Global functions
NvecNAs Man page Source code
ashRemoveGeneticPops Man page Source code
ashSetupLandscape Man page Source code
assignRefugiaFromAbundanceRaster Man page Source code
chooseRefugeCells Man page Source code
data_reformat Source code Source code
def_grid_pred2 Man page Source code
distancePDF Man page Source code
doesGmapCombine Man page Source code
drawParms Man page Source code
enmScenarios Man page
extirpate Source code
fake.data Source code
forwardGUI Man page Source code
fsc.rename Source code
get.gSum Man page Source code
get.nSNP Man page Source code
getpophist2.cells Man page Source code
getsrc Source code
getsrcC Source code
getsrcC2 Source code
graph_theory Source code Source code
growpops Source code
gssa_raggedness Source code Source code
holoSimCell Man page
holoStats Man page Source code Source code
imputed Man page
integratedDispMat Man page Source code
integratedMigMat Man page Source code
loc.mafreq Source code
mafreq Source code
maj_min_fix Source code Source code
make.gmap Man page Source code
makePopdf Man page Source code
makeRmat Source code
makeRmatBetter Source code
makeRmatC Source code
makeRmatVec Source code
mantel_SSS Source code Source code
monmonier_SSS Source code Source code
moran_SSS Source code Source code
nameStrat Source code
newLandscapeDim Man page Source code
old_gssa_raggedness Source code
oneMultinomCall Source code
parseColhist Man page Source code
parsePopslst Source code
plotCellsOnSuit Man page Source code
plotHistSlice Man page Source code
plothist Man page Source code
pollenPulls Man page
pophist.aggregate Man page Source code
pophistToArray Man page Source code
popmap Man page
psiCalc Source code Source code
psiCalc_OLD Source code
pts Man page
pwise.fst.glob Source code
pwise.fst.loc Source code
pwise.het Source code
pwise.het.slow Source code
pwise.het.slowest Source code
pwise.nei Source code
runFSC_step Source code
runFSC_step_OLD Source code
runFSC_step_agg Source code
runFSC_step_agg3 Man page Source code
sPCA.dist Source code Source code
sampleOnePerLocus Source code
segmentGLM Source code
semivar_SSS Source code Source code
stats.AFS Source code Source code
submat Source code
testCoal Source code
testPophist Man page Source code
transSampLoc Man page Source code
tryCatch.W.E Source code Source code
uniqueSampled Source code
whichMultinom Source code
stranda/holoSimCell documentation built on Aug. 4, 2023, 1:12 p.m.