chooseRefugeCells: Choose refuge cells from a plot of the landscape used in the...
In stranda/holoSimCell: Linked demographic/genetic simulation
chooseRefugeCells R Documentation
Choose refuge cells from a plot of the landscape used in the simulations.
Description
Interactive function allowing a user to identify specific cells on the landscape, which can be used as starting locations for a forward-time demographic simulation.
Usage
chooseRefugeCells(r)
Arguments
r
this is the surface (a single raster layer)
Details
Interactive function using locator() to identify cell IDs from user input. Assumes refugia include a central cell and adjacent cells in each cardinal direction (5 total).
Value
A vector of five cell IDs associated with the user-specified refuge location
See Also
locator, getpophist2.cells
Examples
library(holoSimCell)
rs <- raster::brick(paste0(system.file("extdata","rasters",package="holoSimCell"),"/","study_region_daltonIceMask_lakesMasked_linearIceSheetInterpolation.tif"))
chooseRefugeCells(rs[[1]])
stranda/holoSimCell documentation built on Aug. 4, 2023, 1:12 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| chooseRefugeCells | R Documentation |
Choose refuge cells from a plot of the landscape used in the simulations.
Description
Interactive function allowing a user to identify specific cells on the landscape, which can be used as starting locations for a forward-time demographic simulation.
Usage
chooseRefugeCells(r)
Arguments
r |
this is the surface (a single raster layer) |
Details
Interactive function using locator() to identify cell IDs from user input. Assumes refugia include a central cell and adjacent cells in each cardinal direction (5 total).
Value
A vector of five cell IDs associated with the user-specified refuge location
See Also
locator, getpophist2.cells
Examples
library(holoSimCell)
rs <- raster::brick(paste0(system.file("extdata","rasters",package="holoSimCell"),"/","study_region_daltonIceMask_lakesMasked_linearIceSheetInterpolation.tif"))
chooseRefugeCells(rs[[1]])
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.