imputed: Genotypes for green ash (_Fraxinus pennsylvanica_)
In stranda/holoSimCell: Linked demographic/genetic simulation
imputed R Documentation
Genotypes for green ash (Fraxinus pennsylvanica)
Description
A set of SNP genotypes collected for green ash (Fraxinus pennsylvanica Marshall) throughout North america. This data frame has columns that correspond to individuals and rows that correspond to SNP loci. The individual IDs are used in column names and mapped back to populations in data(popmap). Genotype calls were made following alignment to the F. pennsylvanica genome from Huff et al. 2021 - https://doi.org/10.5281/zenodo.5176117.
Usage
data(imputed)
Format
data frame with 1306 rows (loci) and 362 columns (individuals)
References
stranda/holoSimCell documentation built on Aug. 4, 2023, 1:12 p.m.
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| imputed | R Documentation |
Genotypes for green ash (Fraxinus pennsylvanica)
Description
A set of SNP genotypes collected for green ash (Fraxinus pennsylvanica Marshall) throughout North america. This data frame has columns that correspond to individuals and rows that correspond to SNP loci. The individual IDs are used in column names and mapped back to populations in data(popmap). Genotype calls were made following alignment to the F. pennsylvanica genome from Huff et al. 2021 - https://doi.org/10.5281/zenodo.5176117.
Usage
data(imputed)
Format
data frame with 1306 rows (loci) and 362 columns (individuals)
References
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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