export3Cseq2bedGraph: export interaction regions to the 'bedGraph' format

Description Usage Arguments Value Author(s) See Also Examples

Description

export interaction regions from RagedData to the bedGraph format, which suitable for uploading to the UCSC genome browser

Usage

1
export3Cseq2bedGraph(object,datatype=c("rpm","read_count"))

Arguments

object

r3Cseq object, The object might contain the interaction regions generated by function getInteractions

datatype

read_count : read count per restriction fragment rpm : normalized read per million per restriction fragment

Value

The text file in 'bedGraph' format

Author(s)

S. Thongjuea

See Also

exportInteractions2text

Examples

1
#See the vignette	

supatt/r3Cseq documentation built on May 3, 2019, 1:46 p.m.