Files in superkits/CorMut
Detect the correlated mutations based on selection pressure
DESCRIPTION
NAMESPACE
R/ClassMethod.R
R/CorMut-internal.R
R/S4accessor.R
R/biCompare_method.R
R/ckaksAA.R
R/ckaks_codon.R
R/freqCompute.R
R/jiAA.R
R/kaksAA.R
R/kaksCodon.R
R/miAA.R
R/miCodon.R
R/seqFormat.R
inst/extdata/PI_treatment.aln
inst/extdata/PI_treatment_naive.aln
man/CorMut-package.Rd
man/JI-class.Rd
man/MI-class.Rd
man/biCkaksCodon-class.Rd
man/biCompare-class.Rd
man/biCompare-methods.Rd
man/ckaks-class.Rd
man/ckaksAA.Rd
man/ckaksCodon.Rd
man/filterSites-methods.Rd
man/jiAA.Rd
man/kaksAA-class.Rd
man/kaksAA.Rd
man/kaksCodon-class.Rd
man/kaksCodon.Rd
man/miAA.Rd
man/miCodon.Rd
man/plot-methods.Rd
man/seqFormat-methods.Rd
vignettes/CorMut.Rnw
