API for sustainablefarms/msod
Multispecies Occupancy Detection Models
| Global functions | |
|---|---|
| Edetperspecies.jsodm | Man page Source code |
| Enum_compare | Man page Source code |
| Enum_coverage | Man page Source code |
| Eoccspeciesrichness_raw.jsodm_lv | Source code |
| OLDdetspeciesrichness_raw.jsodm_lv | Source code |
| Odetperspecies | Man page Source code |
| Poutcome | Source code |
| abind_alongNp1 | Source code |
| apply_to_new_data | Man page Source code |
| arr3_sumalong2 | Source code |
| artificial_covar | Source code |
| artificial_covar_data | Man page Source code |
| artificial_runjags | Man page Source code |
| as_list_format | Man page Source code |
| bugsvar2array | Man page Source code |
| bugsvar2array_vector | Man page Source code |
| bugsvar2matrix | Man page Source code |
| cdfvals_2_dsres_discrete | Man page Source code |
| checkwritable | Source code |
| colprods_arr | Source code |
| condition_nonzero.cdf | Source code |
| condition_nonzero.pdf | Source code |
| detectednumspec | Man page Source code |
| detperspecies_probarr | Source code |
| detspeciesrichness_probarr | Source code |
| detspeciesrichness_raw.jsodm | Source code |
| drop_to_matrix | Source code |
| ds_detection_residuals.fit | Man page Source code |
| ds_detection_residuals.raw | Man page Source code |
| ds_occupancy_residuals.fit | Man page Source code |
| ds_occupancy_residuals.raw | Man page Source code |
| elpd | Man page Source code |
| elpd_compare | Man page Source code |
| eta_fixed | Source code |
| extend.fit | Man page Source code |
| fd_pocc | Man page Source code |
| fitjsodm | Man page Source code |
| get_det_b | Man page Source code |
| get_det_re | Man page Source code |
| get_lv_b | Man page Source code |
| get_lv_v | Man page Source code |
| get_lv_v_spatscale | Man page Source code |
| get_lv_v_timescale | Man page Source code |
| get_occ_b | Man page Source code |
| hpd_narray | Source code |
| likelihood | Man page Source code |
| likelihood.jsodm | Man page Source code |
| likelihood.jsodm_lv | Man page Source code |
| likelihood.jsodm_lv_allsites | Source code |
| likelihood.jsodm_lv_sepexp | Man page Source code |
| likelihood_LVvmarg_draw.jsodm_lv | Man page Source code |
| likelihood_LVvmarg_draw.jsodm_lv_sepexp | Man page Source code |
| likelihood_draw.jsodm | Source code |
| lppd_newdata | Man page Source code |
| matrix2bugsvar | Man page Source code |
| mb_X2 | Source code |
| mb_simulate | Source code |
| mb_stat | Man page Source code |
| minimise_fit.jsodm_lv | Man page Source code |
| modelqualstats | Man page Source code |
| modelqualstats_holdout | Source code |
| modelqualstats_insample | Source code |
| numdet_cdf | Man page Source code |
| numdet_pdf | Man page Source code |
| occspecrich_difference | Man page Source code |
| occspecrichness.jsodm | Source code |
| occspecrichness.jsodm_lv | Source code |
| occspecrichnessRV.jsodm_lv | Source code |
| occspecrichness_avsite.jsodm | Source code |
| occspecrichness_avsite.jsodm_lv | Source code |
| paraminits | Man page Source code |
| paraminits.jsodm | Man page Source code |
| paraminits.jsodm_lv | Man page Source code |
| paraminits.jsodm_lv_re | Source code |
| paraminits.jsodm_lv_sepexp | Source code |
| parnames | Man page |
| pdet_occ | Source code |
| pdet_occ.jsodm | Source code |
| pdet_occ.jsodm_lv_re | Source code |
| pdet_occ_raw.jsodm | Man page Source code |
| pdet_occ_raw.jsodm_lv_re | Man page Source code |
| pdetection_occupied.ModelSite.theta | Man page Source code |
| pdetection_occupied_raw | Man page Source code |
| picksummary | Source code |
| poccupancy_margotherspecies.jsodm_lv | Man page Source code |
| poccupancy_margotherspeciespmaxsite.jsodm_lv | Source code |
| poccupancy_mostfavourablesite.jsodm_lv | Source code |
| poccupancy_randomsite.jsodm_lv | Source code |
| poccupy | Man page Source code |
| poccupy.ModelSite.theta | Man page Source code |
| poccupy.jsodm | Source code |
| poccupy.jsodm_lv | Man page Source code |
| poccupy_raw.jsodm | Source code |
| poccupy_raw.jsodm_lv | Source code |
| prednumsuccess | Man page Source code |
| prednumsuccess_ErvVrv | Source code |
| predsumspeciesRV | Man page Source code |
| predsumspeciesRV_newdata | Man page Source code |
| prepJAGSdata2 | Man page Source code |
| prepJAGSdata2.jsodm | Source code |
| prepJAGSdata2.jsodm_lv | Source code |
| prepJAGSdata2.jsodm_lv_re | Source code |
| prepJAGSdata2.jsodm_lv_sepexp | Source code |
| randselRV | Source code |
| replacebeforebracket | Source code |
| replacebetweenticks | Source code |
| rmanybern | Man page Source code |
| rowprods_arr | Source code |
| simDetectedDistr | Source code |
| simulate_detections | Man page Source code |
| simulate_detections_lv.v | Man page Source code |
| simulate_iid_detections | Man page Source code |
| simulate_lv.v | Source code |
| simulateocc | Source code |
| speciesnum.ModelSite.theta | Source code |
| speciesrichness | Source code |
| speciesrichness.jsodm | Source code |
| speciesrichness.jsodm_lv | Source code |
| speciesrichness.jsodm_lv_allsites | Source code |
| speciesrichness_mltn | Man page Source code |
| stdnormthresh.jsodm | Source code |
| stdnormthresh.jsodm_lv | Source code |
| subsetofmodelsites.jsodm_lv | Source code |
| sumRV_margrow | Man page Source code |
| sumspeciesRV_raw | Man page Source code |
| supplant_new_data | Man page Source code |
| supplant_new_data.jsodm | Source code |
| supplant_new_data.jsodm_lv | Source code |
| translatefit | Source code |
